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Hi @evolvedmicrobe I have a quick question, i have few aligned bam files from single cell RNA Seq data. I want to regenerate fastqs from them. In order to do so i am using cellranger's bamtofastq and …
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Hello,
This is more of a usage guideline ask rather than any issue in Kallisto. Since the advent of the d-list option in Kallisto, I have been wondering if it should always be turned on when runnin…
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https://mp.weixin.qq.com/s/ND6DdFmggy-apPMCWXMybQ
ixxmu updated
9 months ago
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https://mp.weixin.qq.com/s/YU6VwYYrL97q2Z_NNDh7AQ
ixxmu updated
8 months ago
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https://mp.weixin.qq.com/s/yNzFblUS2oNPqGngafDTlg
ixxmu updated
9 months ago
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We can look at this open-source project to easily load in single-cell RNA seq data in batches in pytorch:
https://chanzuckerberg.github.io/cellxgene-census/notebooks/experimental/pytorch.html
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https://mp.weixin.qq.com/s/k27AnXbft6b_5KW2uTwIIg
ixxmu updated
8 months ago
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https://mp.weixin.qq.com/s/r7kXSeB9bbCqPGLEUYRhsQ
ixxmu updated
8 months ago
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**DO NOT INCLUDE REQUESTS IN THE FIRST COMMENT.**
**PLEASE POST THIS TEMPLATE UNCHANGED THEN FOLLOW ITS INSTRUCTIONS IN A NEW
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# General Notes
This repository serves as a mostly automated p…
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**DO NOT INCLUDE REQUESTS IN THE FIRST COMMENT.**
**PLEASE POST THIS TEMPLATE UNCHANGED THEN FOLLOW ITS INSTRUCTIONS IN A NEW
COMMENT**
# General Notes
This repository serves as a mostly automated p…