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**Describe the issue**
I am analyzing whole genome sequencing(WGS) data in rice(Oryza.sativa) plants. When I use the following command to create the rice database, I encounter this problem. It should…
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For the scoreset page, if the parent experiment has a raw read identifier, link out to SRA/ERA/DDBJ, GEO, or Array Express. Code is maintained by idutils, but alan wrote it. It is intentional that sco…
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I want to use RIAssigner to calculate retention indices (for MS-DIAL) to reanalyze GC-MS data like
- https://ddbj.nig.ac.jp/public/metabobank/project/MTBKS1/
- https://ddbj.nig.ac.jp/public/metaboba…
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https://ncbiinsights.ncbi.nlm.nih.gov/2018/12/03/adapting-flatfile-parsers-genbank-new-accession-formats/
"the LOCUS line, includes the “Locus Name” (usually identical to the accession number), whi…
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Hello!
**Does dCNS have any requirements for the gff3 files, such as five_prime_UTR, exon and three_prime_UTR content must be contain？**
When I run ```dCNS maskGenome```to mask the query genome, it …
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This recommendation was raised in the [review of the Poseidon paper](https://elifesciences.org/reviewed-preprints/98317v1/reviews#tab-content#tab-content).
> The BioSamples database (https://www.eb…
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I think this record
http://bioregistry.io/registry/biosample
is a bit confusing w.r.t whether it is for EBI biosample IDs or INSDC biosample IDs
Of course, for samples, EBI/ DDBJ/NCBI all use t…
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http://pmd.ddbj.nig.ac.jp/~pmd/pmd.html
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I currently have the `@max_time` set to `23:59:00` in my clusterflow.config file and I have changed cr_download.cfmod.pl to make the time equal to `num_files * 60` because my cluster is not on a dial …
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secret_key SHOULD be not written here .
Delete this line or following best practice.
https://github.com/ddbj/imputation-server-ui/blame/main/app.py#L9