-
Hello,
I'm currently using NICHES to analyze Visium ST data. Ideally, I want to run NICHES on clusters of spots. Does the "local microenvironment" talked about in the Bioinformatics paper refer to …
-
Es gibt ein paar Felder innerhalb der IHC, mit denen ich primär nichts anfangen konnte. Die scheinen aber alle PD-L1-spezifisch zu sein.
TPS (Tumor Proportion Score) focuses on the proportion of t…
-
**Käsitteen tyyppi**
CONCEPT
**Ehdotettu termi suomeksi**
follikulaarinen neste
**Ehdotettu termi ruotsiksi**
**Ehdotettu termi englanniksi**
follicular fluid
**Tarkoitusta täsmentävä selite…
-
Hello everyone,
I re-run the analysis https://spateo-release.readthedocs.io/en/latest/tutorials/notebooks/3_cci/2_microenvironment_modeling_analysis.html#, but I got an error when running the foll…
-
Hi @ktroule ,
When I run cpdb_statistical_analysis_method.call with microenvironments file, the error arose: Exception: Some clusters/cell_types in microenvironments file are not present in metadata.…
-
This one affects files that have been uploaded without a description (currently
110 - most recent numbers via http://tools.wmflabs.org/catscan2/quick_intersection.php?lang=commons&project=wikimedia&ca…
-
Hello,
I'm interested in using MutComputeX to generate scoring matrices for several custom design structures. How can I generate the serialized microenvironments and snapshots needed for model inpu…
-
Hi,
In the tutorial, it's said "The triangle is colour-coded: White means more significant; Black means more probability that it happens by chance."
But in the paper "ImaCytE: Visual Exploration o…
-
Hi Tinyi,
Firstly, I would like to express my appreciation for developing BayesPrism, a user-friendly software that has significantly aided my research. However, I have encountered some issues duri…
-
### Project short name:
GSE114727_BreastTumorMicroenvironment
### Primary Wrangler:
Ray
### Secondary Wrangler:
Enrique
### Associated files
* Google Drive:
### Published study links
* Paper:…