Dev

[drosofff]

implement galaxykickstart_from_workflow.py to create a Galaxy server flavor from .ga workflow file(s). Running galaxykickstart_from_workflow.py from the script folder

• creates a new inventory file in inventory_files folder
• creates a "gks_workflows" file in group_vars folder
• creates a tool_list.yml file from galaxy workflow files and copy these files in an extra-files/gks_workflows folder

In addition, a scripts/galaxykickstart_from_workflow_templates folder contains the template files

• group_vars_template.yml
• tool_sheds_conf.xml.sample

[mvdbeek]

@drosofff you'll have to rebase this on top of the current master branch.

So while you're on this branch, fetch from the GalaxyKickstart remote (git fetch origin, I guess). Then git rebase origin/master should do it. (This reverts all commits, and then plays them back on top of the current master branch). You'll probably have to resolve a few conflicts in the .travis.yml.

[drosofff]

So while you're on this branch

means the dev branch, right ?

[mvdbeek]

Yes

[drosofff]

Fix ansible-artimed to GalaxyKickStart before merge