@ccedmendoza Another problem with the new workflow for 3-3 use case:
It is interrupted at a blast alignment step (dataset 22), in your test as in mine. I think it is just a problem of reconnecting data collections with new tool version. At least I already saw this kind of issue before. Generally if you reassemble carrefully the workflow from scratch, it is fixed.
@ccedmendoza Another problem with the new workflow for 3-3 use case:
It is interrupted at a blast alignment step (dataset 22), in your test as in mine. I think it is just a problem of reconnecting data collections with new tool version. At least I already saw this kind of issue before. Generally if you reassemble carrefully the workflow from scratch, it is fixed.