AlexsLemonade / refinebio

Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.
https://www.refine.bio/
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Fix MicroArray end to end tests #3278

Open arkid15r opened 1 year ago

arkid15r commented 1 year ago

Context

In order to complete restoring staging deploy process the CI/CD errors need to be fixed.

Problem or idea

SurveyJob 129104 failed!
F
======================================================================
FAIL: test_all_the_things (tests.foreman.test_end_to_end.FullFlowEndToEndTestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python3.8/unittest/case.py", line 60, in testPartExecutor
    yield
  File "/usr/lib/python3.8/unittest/case.py", line 676, in run
    self._callTestMethod(testMethod)
  File "/usr/lib/python3.8/unittest/case.py", line 633, in _callTestMethod
    method()
  File "/home/user/tests/foreman/test_end_to_end.py", line 234, in test_all_the_things
    self.process_experiments()
  File "/home/user/tests/foreman/test_end_to_end.py", line 278, in process_experiments
    self.assertTrue(wait_for_job(survey_job))
  File "/usr/lib/python3.8/unittest/case.py", line 765, in assertTrue
    raise self.failureException(msg)
AssertionError: False is not true

----------------------------------------------------------------------
Ran 2 tests in 998.808s

FAILED (failures=1)
Error: Process completed with exit code 1.

Solution or next step

Troubleshoot and fix the end2end tests errors.

arkid15r commented 1 year ago

Temporary disabled in https://github.com/AlexsLemonade/refinebio/pull/3275