AllenInstitute / visual_coding_2p_analysis

Visual Coding 2P analysis code
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import core #23

Open alih100011 opened 1 year ago

alih100011 commented 1 year ago

Hi! I want to use this code in colab to extract event trace of an experiment in brain_observatory_cache but it dose not run

Error : NameError Traceback (most recent call last)

in ----> 1 l0a = L0_analysis(data_set) 2 events = l0a.get_events()

in init(self, dataset, event_min_size, noise_scale, median_filter_1, median_filter_2, halflife_ms, sample_rate_hz, genotype, L0_constrain, use_cache, use_bisection) 82 self.median_filter_2 = median_filter_2 83 self.L0_constrain = L0_constrain ---> 84 self.cache_directory = core.get_cache_path() 85 86 self._noise_stds = None

NameError: name 'core' is not defined ..........................................................................................................................................................................................................

And

import core not work

alih100011 commented 1 year ago

import core not work .what could I do to solve this problem?

Thank you!