I read the article publised by your lab:
Zhou, Z., St. John, E., Anantharaman, K. et al. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Microbiome 10, 241 (2022). https://doi.org/10.1186/s40168-022-01424-7
I read that you used normalization before you conducted your analysis. I want to know if there is a command line to set the number of reads to a certain number. I have multiple samples I want to account for the depth of sequences and also will compare them to other datasets similar to your works.
I hope I can get help regarding this simple yet crucial step.
""
source:
Zhou, Z., St. John, E., Anantharaman, K. et al. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Microbiome 10, 241 (2022). https://doi.org/10.1186/s40168-022-01424-7
Dear AnantharamanLab team,
I read the article publised by your lab: Zhou, Z., St. John, E., Anantharaman, K. et al. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Microbiome 10, 241 (2022). https://doi.org/10.1186/s40168-022-01424-7
I read that you used normalization before you conducted your analysis. I want to know if there is a command line to set the number of reads to a certain number. I have multiple samples I want to account for the depth of sequences and also will compare them to other datasets similar to your works. I hope I can get help regarding this simple yet crucial step.
"
"
source: Zhou, Z., St. John, E., Anantharaman, K. et al. Global patterns of diversity and metabolism of microbial communities in deep-sea hydrothermal vent deposits. Microbiome 10, 241 (2022). https://doi.org/10.1186/s40168-022-01424-7