Arcadia-Science / seqqc

A Nextflow pipeline to identify quality control issues with new sequencing data.
MIT License
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Move away from nf-core-modified #42

Open mertcelebi opened 1 year ago

mertcelebi commented 1 year ago

Description of feature

See this thread on Slack for more details.

At Arcadia, we have been using a separate folder under local called nf-core-modified for nf-core modules that we had to patch ourselves to make them work with downstream processes. Apparently, there's a formal way of doing this with nf-core modules patch, so we should switch to that structure in a future release of this pipeline.