ArcanaFramework / arcana

Abstraction of Repository Centric ANAlysis
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Adds commands to perform auto-update of XNAT container service images #131

Closed tclose closed 2 years ago

tclose commented 2 years ago

Deployment process now builds a "metapackage" containing a manifest of the built pipelines and a copy of arcana with two new commands

codecov-commenter commented 2 years ago

Codecov Report

Base: 76.77% // Head: 76.14% // Decreases project coverage by -0.63% :warning:

Coverage data is based on head (e5e02c5) compared to base (4361561). Patch coverage: 44.76% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #131 +/- ## ========================================== - Coverage 76.77% 76.14% -0.64% ========================================== Files 57 57 Lines 5830 5919 +89 Branches 1256 1187 -69 ========================================== + Hits 4476 4507 +31 - Misses 1032 1084 +52 - Partials 322 328 +6 ``` | [Impacted Files](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service) | Coverage Δ | | |---|---|---| | [arcana/test/fixtures/medimage/\_\_init\_\_.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL3Rlc3QvZml4dHVyZXMvbWVkaW1hZ2UvX19pbml0X18ucHk=) | `100.00% <ø> (ø)` | | | [arcana/deploy/medimage/xnat.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL2RlcGxveS9tZWRpbWFnZS94bmF0LnB5) | `79.61% <14.28%> (-2.30%)` | :arrow_down: | | [arcana/cli/deploy.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL2NsaS9kZXBsb3kucHk=) | `58.29% <45.78%> (-3.79%)` | :arrow_down: | | [arcana/data/stores/medimage/xnat/cs.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL2RhdGEvc3RvcmVzL21lZGltYWdlL3huYXQvY3MucHk=) | `79.34% <50.00%> (-1.98%)` | :arrow_down: | | [arcana/test/fixtures/medimage/xnat.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL3Rlc3QvZml4dHVyZXMvbWVkaW1hZ2UveG5hdC5weQ==) | `69.51% <54.54%> (-2.32%)` | :arrow_down: | | [arcana/core/deploy/build.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL2NvcmUvZGVwbG95L2J1aWxkLnB5) | `69.11% <0.00%> (-2.21%)` | :arrow_down: | | [arcana/data/stores/bids/dataset.py](https://codecov.io/gh/Australian-Imaging-Service/arcana/pull/131/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service#diff-YXJjYW5hL2RhdGEvc3RvcmVzL2JpZHMvZGF0YXNldC5weQ==) | `70.14% <0.00%> (-0.15%)` | :arrow_down: | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Australian-Imaging-Service)

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