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BGSpiegl
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GCparagon
commandline tool for fast computation and correction of GC biases in WGS DNA datasets from liquid biopsy samples taking the fragment length into account
MIT License
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In orden_bams: "ValueError: invalid literal for int() with base 10: 'A*01:02'"
#13
Rociocc93
closed
2 days ago
6
.org.chromium.Chromium.cM7e3N failed: No such file or directory (2) when running with --output-bam flag
#12
mariaalexandrastanciu
closed
5 days ago
5
File "/opt/conda/envs/GCparagon/lib/python3.10/site-packages/GCparagon/correct_GC_bias.py", line 3069, in main raise AttributeError(f"2bit reference genome file '{two_bit_reference_file}' does not exist!")
#11
mariaalexandrastanciu
closed
1 week ago
18
NameError
#10
gh-cguzman
closed
3 months ago
2
Question about tagged BAM output
#9
gh-cguzman
closed
3 months ago
2
ERROR: Too many open files
#8
gh-cguzman
closed
3 months ago
2
- include definition file for singularity image: singularity_definiti…
#7
Isy89
closed
5 months ago
0
Why are all my sample's *.GCcontent_RefVsReconstructed.png files the same?
#6
chenzemin
closed
5 months ago
4
Error tagged bam
#5
AntonioDeFalco
closed
6 months ago
3
Genomic Region Preselection files for hg19
#4
Kange2014
closed
8 months ago
10
GCparagon installation fails through mamba/conda
#3
Rociocc93
closed
9 months ago
5
fix: add Path type to CLI file inputs
#2
sroener
closed
9 months ago
1
Including egas00001006963 results dev
#1
BGSpiegl
closed
1 year ago
0