BUStools bustools issues

BUStools / bustools

Tools for working with BUS files

https://bustools.github.io/

BSD 2-Clause "Simplified" License

92 stars 23 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

bustools fails to build on many architectures

#60 mestia opened 4 years ago
1
Prediction

#59 johan-gson closed 4 years ago
0
Butterfly

#58 johan-gson closed 4 years ago
0
bustools workflow for snRNA-seq detects many more genes/UMIs than cellranger

#57 jrknoedler opened 4 years ago
0
InDrops V2 variable lengths

#56 kushtimusPrime opened 4 years ago
0
Fewer genes detected for CEL-seq2 data

#55 YOU-k opened 4 years ago
3
kb count Being SIGKILL'd at bustools sort Step

#54 jggatter closed 4 years ago
0
bustools linker produces wrong output

#53 mkabza opened 4 years ago
0
bustools correct Celseq whitelist recognized 1 character extra

#52 dwkarjosukarso closed 4 years ago
1
Project->Text did not work on Windows - easy fix

#51 johan-gson opened 4 years ago
0
Release mode

#50 pmelsted closed 4 years ago
0
bustools correct : 'std::bad_alloc'

#49 mdeloger opened 4 years ago
38
gene.gene.txt no symbols

#48 BarryDigby closed 3 years ago
4
bustools count crashes on Linux but not on Mac

#47 smoretti closed 4 years ago
2
GitHub actions for automatic builds

#46 Lioscro closed 4 years ago
1
eq class IDs are different before and after counting

#45 vivekbhr closed 4 years ago
0
Discrepancy between bustools inspect and bustools count, particularly with short UMI sample

#44 skannan4 opened 4 years ago
6
github actions test

#43 Lioscro closed 4 years ago
0
how to compare eq classes between multiple runs

#42 vivekbhr closed 4 years ago
2
Spliced and unspliced matrix

#41 alyzas opened 5 years ago
0
TCC mtx file is not valid

#40 lambdamoses closed 5 years ago
5
Segmentation fault when using bustools sort

#39 tracytktran closed 5 years ago
1
Resizing glist when running bustools count

#38 gtca closed 5 years ago
1
Fixed typo in description

#37 anmolsagarwal closed 5 years ago
0
Typo

#36 smoretti closed 5 years ago
0
CEL-seq2 barcode length and whitelist length differ

#35 YOU-k closed 5 years ago
0
Hi,

#34 YOU-k closed 5 years ago
0
Mix-up spliced/unspliced in velocity tutorials

#33 julien-roux closed 5 years ago
2
bustools merge, bustools extract, bustools capture --flags

#32 laureneliu closed 5 years ago
0
Segmentation fault 11

#31 astrovsky01 closed 5 years ago
2
Empty folder generated with counts

#30 astrovsky01 closed 5 years ago
1
how UMIs are counted into gene level or transcript level

#29 ruqianl closed 5 years ago
0
barcodes is empty

#28 kaji331 closed 5 years ago
5
t2g.py does not create proper transcript_to_gene.txt

#27 alexblaessle closed 5 years ago
1
UMI counts by transcripts

#26 yarloz-old closed 5 years ago
1
Please add some checks to your c functions!

#25 stela2502 closed 5 years ago
4
bustools sort dies without error message

#24 stela2502 closed 5 years ago
2
Unable to build bustools in Docker

#23 jamesrhowe closed 5 years ago
4
typo in memory message

#22 jamestwebber closed 5 years ago
0
conda install bustools downgrades kallisto?

#21 jamestwebber closed 5 years ago
6
Issue with bus capture RNA velocity

#20 mcmccon closed 5 years ago
0
Update bustools_whitelist.cpp

#19 Gibbsdavidl closed 5 years ago
1
Trouble Assigning Gene Names

#18 ybaglaen closed 5 years ago
0
Issues with the BUS specification

#17 slinnarsson closed 5 years ago
0
Missing -s flag for bedtools getfasta

#16 slinnarsson closed 5 years ago
1
build problem - not declared in scope - pow

#15 bmcgough closed 5 years ago
3
Consider output in loom file format

#14 slinnarsson closed 5 years ago
2
problem with bustools capture

#13 raymondlouie closed 5 years ago
2
Barcodes containing N

#12 lonsbio closed 5 years ago
1
nuclear RNA

#11 lpantano opened 5 years ago
20

Previous Next