Issue about tandem repeat GAA in FXN gene missed by TRF.

Benson-Genomics-Lab / TRF

Tandem Repeats Finder: a program to analyze DNA sequences

https://tandem.bu.edu/trf/trf.html

GNU Affero General Public License v3.0

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Issue about tandem repeat GAA in FXN gene missed by TRF. #16

Open fjmuzengyiheng opened 1 year ago

fjmuzengyiheng commented 1 year ago

Hi, I am new to this fantastic tool TRF. When I explore GAA tandem repeats in FXN gene (responsible for a neurogenetic disease, Friedreich ataxia) using UCSC "simple repeats" track, I found this motif "GAA" is not recognized by TRF. I am confused about this.

Could anyone help me with this issue? Thank you!

The locus (hg38): chr9:69037261-69037304