bioc-issue-bot
commented
5 years ago Hi @aprice26
Thanks for submitting your package. We are taking a quick look at it and you will hear back from us soon.
The DESCRIPTION file for this package is:
Package: brainflowprobes
Type: Package
Title: Plots and annotation for choosing BrainFlow target probe sequence
Version: 0.99.0
Authors@R: c(person("Amanda", "Price", email = "amanda.joy.price@gmail.com",
role = c("aut", "cre"), comment = c(ORCID = "0000-0001-7352-3732")),
person("Leonardo", "Collado-Torres", role = c("ctb"),
email = "lcolladotor@gmail.com", comment = c(ORCID = "0000-0003-2140-308X")))
Description: Use these functions to characterize genomic regions for
BrainFlow target probe design.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Depends:
R (>= 3.6.0)
Imports:
Biostrings (>= 2.52.0),
BSgenome.Hsapiens.UCSC.hg19 (>= 1.4.0),
bumphunter (>= 1.26.0),
cowplot (>= 1.0.0),
derfinder (>= 1.18.1),
derfinderPlot (>= 1.18.1),
GenomicRanges (>= 1.36.0),
ggplot2 (>= 3.1.1),
RColorBrewer (>= 1.1),
utils,
grDevices
RoxygenNote: 6.1.1
Suggests:
BiocStyle,
knitcitations,
knitr,
rmarkdown,
sessioninfo,
testthat (>= 2.1.0)
VignetteBuilder: knitr
URL: https://github.com/LieberInstitute/brainflowprobes
BugReports: https://support.bioconductor.org/t/brainflowprobes/
biocViews: Coverage, Visualization, ExperimentalDesign, Transcriptomics,
FlowCytometry, GeneTarget
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aprice26
Liubuntu
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Update the following URL to point to the GitHub repository of the package you wish to submit to Bioconductor
Confirm the following by editing each check box to '[x]'
[x] I understand that by submitting my package to Bioconductor, the package source and all review commentary are visible to the general public.
[x] I have read the Bioconductor Package Submission instructions. My package is consistent with the Bioconductor Package Guidelines.
[x] I understand that a minimum requirement for package acceptance is to pass R CMD check and R CMD BiocCheck with no ERROR or WARNINGS. Passing these checks does not result in automatic acceptance. The package will then undergo a formal review and recommendations for acceptance regarding other Bioconductor standards will be addressed.
[x] My package addresses statistical or bioinformatic issues related to the analysis and comprehension of high throughput genomic data.
[x] I am committed to the long-term maintenance of my package. This includes monitoring the support site for issues that users may have, subscribing to the bioc-devel mailing list to stay aware of developments in the Bioconductor community, responding promptly to requests for updates from the Core team in response to changes in R or underlying software.
I am familiar with the essential aspects of Bioconductor software management, including:
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(next line added by mtmorgan during package acceptance)
AdditionalPackage: https://github.com/LieberInstitute/GenomicState