Bioconductor ExperimentHub issues

Bioconductor / ExperimentHub

Client to access ExperimentHub resources

https://bioconductor.org/packages/ExperimentHub

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issues

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ExperimentHub is not prompting to create cache

#44 jwokaty opened 3 days ago
3
resources failed to download when building package

#43 whtns closed 3 months ago
2
No connection check if localHub=True

#42 votti closed 3 months ago
3
Connection attempt while 'localHub=TRUE' leads to lengthy timeout on offline systems

#41 votti closed 3 months ago
2
ExperimentHub function error

#40 DongqiangZeng0808 closed 5 months ago
2
Defer internet access to accessor functions created by createHubAccessors()

#39 hpages closed 7 months ago
2
Race conditions resulting in "Corrupt Cache: sqlite file"

#38 HenrikBengtsson opened 7 months ago
0
Update to ask to install or fail gracefully if not interactive

#37 lshep closed 8 months ago
2
Cannot connect to ExperimentHub server

#36 qingbinzhou closed 7 months ago
1
ExperimentHub() error ! Failed to collect lazy table.

#35 dvera closed 1 year ago
1
resources failed to download

#34 kazaguls opened 1 year ago
3
http 409

#33 yyang-SDI closed 1 year ago
11
A resource should not been made available until it's fully downloaded

#32 hpages opened 1 year ago
2
partial connectivity through authenticated proxy

#31 delocalizer closed 1 year ago
8
devel branch error ... GenomicAlignments issue?

#30 vjcitn closed 1 year ago
5
Updates to the package to remove check warnings and notes

#29 LiNk-NY closed 1 year ago
0
add section in vignette with BiocHubsShiny

#28 LiNk-NY closed 1 year ago
1
downloading data onto a HPC that is locked off from the internet

#27 chrisclarkson opened 1 year ago
1
Error in ExperimentHub::ExperimentHub

#26 LDHHAHA closed 5 months ago
1
helper function to prioritize link over EH resource location

#25 LiNk-NY closed 2 years ago
2
Update ExperimentHub.Rmd

#24 mikelove closed 2 years ago
0
Error: failed to connect to local data base

#23 komalsrathi closed 3 years ago
1
snapshotDate(): 2021-08-27

#22 GuidoBarzaghi closed 3 years ago
0
Error when using ExperimentHub() function

#21 ChrisShore closed 3 years ago
1
helper function for easily removing a resource by ID

#20 LiNk-NY closed 3 years ago
5
update preparerclass documentation

#19 mtmorgan closed 3 years ago
0
Fix typo in vignette

#18 milanmlft closed 3 years ago
0
Fixed a couple of typos and formatting issues in the vignette.

#17 federicomarini closed 3 years ago
0
Documentation for `...` in ExperimentHub constructor missing?

#16 LiNk-NY closed 3 years ago
2
Using R 4.0.3 seem to have issue in extracting FaFile

#15 cying111 closed 4 years ago
1
Failed to connect to bioconductor.org port 80

#14 aciolfi closed 4 years ago
18
Improvements to the ExperimentHub constructor

#13 LTLA closed 4 years ago
0
Misleading error message upon lack of connectivity

#12 LTLA closed 4 years ago
1
old snapshot

#11 ghost closed 4 years ago
2
ExperimentHub() timeout error

#10 xingrenUB closed 4 years ago
4
failed to connect / reason: Scanner error: mapping values are not allowed in this context at line 4, column 22

#9 nebetbastet closed 4 years ago
4
Sync localHub documentation with code

#8 PeteHaitch closed 4 years ago
1
Minor doc fixes for option getting.

#7 LTLA closed 5 years ago
2
localHub=TRUE not sufficient for offline use

#6 vjcitn closed 2 years ago
27
put head() around unique(eh$dataprovider)

#5 lwaldron closed 5 years ago
0
Update CreateAnExperimentHubPackage.Rmd

#4 kjohnsen closed 6 years ago
1
ExperimentHub resource EH1039 mislabeled as "RLE-compressed"

#3 hpages closed 6 years ago
3
Data-fetching from multiple processes causes error

#2 zwdzwd opened 6 years ago
6
Need a bit more clarity on upload structure

#1 vjcitn closed 7 years ago
1