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BiomedSciAI
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fuse-med-ml
A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)
Apache License 2.0
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ddp_fix
#270
shatz01
closed
1 year ago
6
add multi-label metric cladd and func
#269
egozi
closed
1 year ago
0
optimized train time for a use case of small samples and large batch
#268
mosheraboh
closed
1 year ago
0
Uncollate is not needed and slows down training
#267
avihu111
closed
1 year ago
1
add props to dataset and pipelines + small fix to cacher
#266
michalozeryflato
closed
1 year ago
0
Ndict support hydra
#265
michalozeryflato
closed
1 year ago
1
fix bug with specific binary input format
#264
alex-golts
closed
1 year ago
0
update JOSS paper citation and badge
#263
alex-golts
closed
1 year ago
0
support shallow copy of pipelines
#262
michalozeryflato
closed
1 year ago
1
Fix the installation protocol so it will be compatible with A100 GPU and CCC's CUDA version
#261
egozi
closed
1 year ago
2
not strict mode in ProjectPatchesTokenizer
#260
avihu111
closed
1 year ago
0
allow non-int sample ids in DatasetDefault
#259
alex-golts
closed
1 year ago
0
Allow non-int sample ids in DatasetDefault
#258
alex-golts
closed
1 year ago
0
a more configureable resnet3d implementation
#257
avihu111
closed
1 year ago
0
Ehr transformer example
#256
ellabarkan
closed
1 year ago
0
fix `LightningDeprecationWarning`
#255
SagiPolaczek
closed
1 year ago
1
`torchvision` version upper bound fix
#254
SagiPolaczek
closed
1 year ago
0
Add a flag for clearml start function to enable/disable it
#253
mosheraboh
opened
1 year ago
0
Remove `torchvision` version upper bound
#252
SagiPolaczek
closed
1 year ago
0
Additional model - `CrossAttentionTransformerEncoder`
#251
SagiPolaczek
closed
1 year ago
0
urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] on CICD
#250
SagiPolaczek
opened
1 year ago
0
CICD fix (!)
#249
SagiPolaczek
closed
1 year ago
0
Shatz caching fixes
#248
shatz01
opened
1 year ago
0
Expose max allowed used space
#247
shatz01
closed
1 year ago
0
add down sample option to BatchSamplerDefault
#246
mosheraboh
closed
1 year ago
0
Ehr transformer ICU example
#245
ellabarkan
closed
1 year ago
2
support not specifying number of channels in ModelMultiHead
#244
alex-golts
closed
1 year ago
2
Simple MNIST Example
#240
shatz01
closed
1 year ago
3
CICD fix
#239
mosheraboh
closed
1 year ago
1
fix learning rate and added config options
#238
liamhazan
closed
1 year ago
1
Auc metric fix
#237
avihu111
closed
1 year ago
0
suggested changes for JOSS
#236
SagiPolaczek
closed
1 year ago
0
knight data download script
#235
alex-golts
closed
1 year ago
0
raise exception in case of str input/outputs
#234
shatz01
closed
1 year ago
0
Some changes from DTI task (Add doc' and some small features)
#233
SagiPolaczek
closed
1 year ago
0
update DL readme according to JOSS reviewer comments
#232
alex-golts
closed
1 year ago
0
Ukbb changes -ensemble of multi-modal survival models
#231
michalozeryflato
closed
1 year ago
2
Add example to Fuse.dl section in the Fuse-med ML paper
#230
anupamajha1
closed
1 year ago
3
State of the field section missing from the fuse-med-ML paper
#229
anupamajha1
closed
1 year ago
2
References missing in the Fuse-med-ML paper
#228
anupamajha1
closed
1 year ago
2
support arbitrary (not sequential and even not ints) balanced class values
#227
mosheraboh
closed
1 year ago
0
Added more descriptive error messages and hints for common usage mistakes
#226
YoelShoshan
closed
1 year ago
0
remove protobuf from dependencies
#225
alex-golts
closed
1 year ago
0
mod for peptide design
#224
mosheraboh
closed
1 year ago
0
Can't install both fuse and tensorflow
#223
alex-golts
closed
1 year ago
2
Add OpTranspose (not critical)
#222
shatz01
opened
1 year ago
0
Add vit isic
#221
shatz01
closed
1 year ago
0
Add OpToNestedTensor (Prototype, for ref)
#220
SagiPolaczek
closed
1 year ago
2
Support batching variable size tensors using nested tensors
#219
mosheraboh
opened
1 year ago
3
adding check for class attribute, fixes issue #217
#218
agiova
closed
1 year ago
0
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