search

Borealis-BioModeling / aurora-pkpd

Open Python Web App for Pharmcological Modeling and Analysis
BSD 2-Clause "Simplified" License
0 stars 0 forks source link

HT Cell Proliferation page #4

Closed blakeaw closed 1 week ago

blakeaw commented 1 month ago

Complete a basic implementation of the HT Cell Proliferation page; pages/pdanalysis/htproliferation.py.

This page will implement some base functionality using the Thunor Core library to load and analyze high-throughput cell proliferation data. We can link to the Thunor Web application for users needing more advanced features and database support.

blakeaw commented 1 month ago

Thunor Web app: https://www.thunor.net/

Since it was developed by LoLab at Vandy (which no longer exists), I wonder if the web app is still being maintained or supported.

blakeaw commented 1 month ago

Thunor Core: https://github.com/alubbock/thunor

alubbock commented 4 weeks ago

Hi Blake, hope you're well. Yes, trying to maintain Thunor Core and Web as time permits. Feel free to open issues if you find anything amiss or have requests, I'll try to take a look. Cheers, Alex

blakeaw commented 3 weeks ago

Since Thunor Web is still active and supported, I think I'll just add an external tools section and point users to it for HT Cell Proliferation analysis rather than trying to implement a subset of features in the Aurora app. Then, I can focus more on implementing the compartmental modeling and non-compartmental analysis features.

blakeaw commented 1 week ago

Addressed in PR https://github.com/Borealis-BioModeling/aurora-pkpd/pull/20