Updates/bug fixes/new version v3.0

CCBR / XAVIER

An easy-to-use, flexible variant calling pipeline for use on the Biowulf cluster at NIH

https://ccbr.github.io/XAVIER/

MIT License

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Closed kopardev closed 1 year ago

kopardev commented 1 year ago

added FRCE support.
adding $triggeroptions to snakemake cli.
using SLURM_SUBMIT_HOST as a secondary environmental variable to extract cluster name information on compute nodes.
func set_tmp() added to repeat tmpdir assignments accross multiple rules.
vcf2maf fix applied.