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DASL-Lab / provoc

PROportions of Variants of Concern using counts, coverage, and a variant matrix.
https://dasl-lab.github.io/provoc/
MIT License
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Implement `predict.provoc` method #13

Closed DBecker7 closed 6 months ago

DBecker7 commented 7 months ago

Function should take in a named list (provoc class) including an estimate of the proportions and the associated variant matrix, do the matrix multiplication, and return the results in the same order as the original data.

danerkestey commented 6 months ago

I will review the provoc class structure and implement the predict.provoc method to perform matrix multiplication using the provided proportions and variant matrix. I'll ensure the function returns results in the same order as the original data and align with the existing class methods.