Add cellranger mkref (cellranger indeces)

DKFZ-ODCF / reference-data

Code to setup and maintain reference assemblies and accompanying data

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Add cellranger mkref (cellranger indeces) #15

Open mobilegenome opened 3 years ago

mobilegenome commented 3 years ago

[ ] scRNA-seq
- https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/using/tutorial_mr#runmkref
[ ] What about scATAC-seq

mobilegenome commented 3 years ago

Software can only be obtained after filling form on 10X website and obtained cookie i.e. a scripted download is not possible. Can module be installed on CI server?