I read the instruction, blobtools_manuscript of the tool.
I found that the hits from diamond(blastx) were convert into a four columns taxified file, but hits from blastn (-outfmt ’6 qseqid staxids bitscore std’) were directly used. The problem is that the blastn hits (database nt) didn't contain the taxonomy part and there also wasn't a conversion file in the DB for genomic_nucleotide_gi to tax_id. Please if there any solution for me?
Hello,
I read the instruction, blobtools_manuscript of the tool. I found that the hits from diamond(blastx) were convert into a four columns taxified file, but hits from blastn (-outfmt ’6 qseqid staxids bitscore std’) were directly used. The problem is that the blastn hits (database nt) didn't contain the taxonomy part and there also wasn't a conversion file in the DB for genomic_nucleotide_gi to tax_id. Please if there any solution for me?
yuweiqiang