I am not used to multithreading and running jobs in parallel.
I wanted to run threads in parallel, so I tried assigning 8 cpu per job, however when I login the computing nodes, only one processor is working per job, even though the log files say the job will work on 8 threads.
Is there another option to assign each thread to a cpu, or is it blocked somehow by my options?
Hello,
I am currently running smartpca on a HPC using slurm.
smartpca version is 18140, and I use the following parameter file.
altnormstype: NO numoutevec: 20 numoutlieriter: 0 numoutlierevec: 0 outliersigmathresh: 6.0 numthreads: 8 qtmode: 0 lsqproject: YES
I am not used to multithreading and running jobs in parallel. I wanted to run threads in parallel, so I tried assigning 8 cpu per job, however when I login the computing nodes, only one processor is working per job, even though the log files say the job will work on 8 threads.
Is there another option to assign each thread to a cpu, or is it blocked somehow by my options?
Thank you in advance.