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Ecogenomics / BamM

Metagenomics-focused BAM file manipulation
http://ecogenomics.github.io/BamM/
GNU Lesser General Public License v3.0
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Links summary #51

Open caonetto opened 6 years ago

caonetto commented 6 years ago

Is it possible to obtain a summary tsv file showing the number of links between each 2 contigs?

Thanks.

wwood commented 6 years ago

Hi, bamm parse -l does something along these lines.