2D decoder place_fields are a fixed value along the Y dimension

Eden-Kramer-Lab / replay_trajectory_classification

State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data

MIT License

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2D decoder place_fields are a fixed value along the Y dimension #35

Open blakeporterneuro opened 2 weeks ago

blakeporterneuro commented 2 weeks ago

Version 1.3.15

When using the 2D decoder, I was getting odd decodes. CA1_2D_acaus_MUA_event_299

I plotted the place fields decoder.plot_place_fields() and saw my fields had stripes in the Y dimension. I checked and the values along the Y dimension are all identical.

edeno commented 2 weeks ago

You're giving it 2D position of shape (n_time, 2)?

blakeporterneuro commented 2 weeks ago

yeah, ndarray, n_time, 2

Array trainingPosArray Plotted