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Ensembl / ensembl-vep

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
https://www.ensembl.org/vep
Apache License 2.0
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Fixing filter when value is hash and contains text and number #1739

Closed likhitha-surapaneni closed 3 months ago

likhitha-surapaneni commented 3 months ago

Issue: https://github.com/Ensembl/ensembl-vep/issues/1723

Testing

filter_vep -i input.vcf --filter "HGNC_ID in HGNC:4836,HGNC:4826" --only_matched 
filter_vep -i input.vcf --filter "HGNC_ID in hgnc.txt" --only_matched 
filter_vep -i input.vcf --filter "HGNC_ID is HGNC:4836" --only_matched
nuno-agostinho commented 3 months ago

Merged to main and release/113.