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FBehrad / Evo_conv

Code of the paper "Evolutionary convolutional neural network for efficient brain tumor segmentation and overall survival prediction
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dataset path #1

Open innocent-oss opened 2 years ago

innocent-oss commented 2 years ago

The code doesn't accept the datasets path. I have mailed you the output kindly have a look. Thank you

FBehrad commented 2 years ago

Have you followed all steps in the Readme file?

innocent-oss commented 2 years ago

yeah I have followed them

FBehrad commented 2 years ago

Unfortunately, the images that you have sent me does not show what is the problem. Please copy the error, and paste it here.

FBehrad commented 2 years ago

You should write your data paths in the config.yaml file. Also, put the zip files next to the config.yaml file. 

path:
  training_set: ../MICCAI_BraTS_2018_Data_Training.zip
  validation_set: ../MICCAI_BraTS_2018_Data_Validation.zip

During the preprocessing, first the data are extracted and saved in the Training and Validation folder. After preprocessing, preprocessed data are saved at val_preprocessed_data and preprocessed_data folders.