GRIFFINCollaboration / detectorSimulations_v10

Geant4 version 10 of the simulation code for the GRIFFIN array and it's suite of ancillary detection systems.
MIT License
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G4Exception #83

Closed Abi-12308 closed 1 year ago

Abi-12308 commented 1 year ago

Hi, I am trying to compile detectorSimulations_v10 using Geant4.10.7.p01 and I am getting this warning message:

-------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : visman0202 issued by : G4Scene::CalculateExtent Scene has no extent. Please activate or add something. The camera needs to have something to point at! Add a volume. (You may need "/run/initialize".) Or use "/vis/scene/add/extent". "/vis/scene/list" to see list of models. This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

As I tried adding detector system, I go this message below:

G4WT1 > -------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : Analysis_W001 issued by : G4RootFileManager::OpenFile() File g4out already exists. This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

G4WT1 > -------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : Analysis_W001 issued by : G4TFileManager::CreateTFile File g4out_t1.root already exists. This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

G4WT1 > -------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : Analysis_W001 issued by : G4RootFileManager::OpenFile() Failed to create file g4out This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

I will appreciate any assistance. Thanks in advance.

Abraham

VinzenzBildstein commented 1 year ago

That sounds like the compiling part works, as that is not a compiler error, but an error running the simulation.

The first warning that you get is exactly what it says. It seems you are trying to run a macro that visualizes a setup, but you haven't specified that setup at all.

The other warnings are saying that a file is already open. I don't know why you are getting these warnings, but they are warnings, not errors, so maybe everything is okay? What does the output look like? And what macro are you running?

Abi-12308 commented 1 year ago

This is how the output looks like in the terminal:

-------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : visman0202 issued by : G4Scene::CalculateExtent Scene has no extent. Please activate or add something. The camera needs to have something to point at! Add a volume. (You may need "/run/initialize".) Or use "/vis/scene/add/extent". "/vis/scene/list" to see list of models. This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

/vis/scene/notifyHandlers

-------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : visman0202 issued by : G4Scene::CalculateExtent Scene has no extent. Please activate or add something. The camera needs to have something to point at! Add a volume. (You may need "/run/initialize".) Or use "/vis/scene/add/extent". "/vis/scene/list" to see list of models. This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

For file-based drivers, use this to create an empty detector view:

/vis/viewer/flush

/run/beamOn 100

Region -- -- appears in world volume This region is in the mass world. Root logical volume(s) : World Pointers : G4VUserRegionInformation[0], G4UserLimits[0], G4FastSimulationManager[0], G4UserSteppingAction[0] Materials : vacuumDensityYoctogramPerCm3 Production cuts : gamma 1 mm e- 10 um e+ 1 mm proton 1 nm

Region -- -- is not associated to any world. Root logical volume(s) : Pointers : G4VUserRegionInformation[0], G4UserLimits[0], G4FastSimulationManager[0], G4UserSteppingAction[0] Materials : Production cuts : gamma 1 mm e- 10 um e+ 1 mm proton 1 nm

========= Table of registered couples ============================

Index : 0 used in the geometry : No Material : G4_AIR Range cuts : gamma 1 mm e- 10 um e+ 1 mm proton 1 nm Energy thresholds : gamma 990 eV e- 990 eV e+ 990 eV proton 0.1 eV

Index : 1 used in the geometry : Yes Material : vacuumDensityYoctogramPerCm3 Range cuts : gamma 1 mm e- 10 um e+ 1 mm proton 1 nm Energy thresholds : gamma 990 eV e- 990 eV e+ 990 eV proton 0.1 eV Region(s) which use this couple : DefaultRegionForTheWorld

==================================================================

Run 0 starts.

Run 0 start.

0 daughter volumes G4WT0 > /tracking/storeTrajectory 2 G4WT1 > /tracking/storeTrajectory 2 G4WT1 > ### Run 2 starts on worker thread 1. G4WT0 > ### Run 2 starts on worker thread 0. G4WT0 > ### Run 2 start. G4WT0 > ---> Begin of event: 0 G4WT1 > Thread-local run terminated. G4WT0 > Thread-local run terminated. G4WT1 > Run Summary G4WT1 > Number of events processed : 23 G4WT1 > User=0.000000s Real=0.000374s Sys=0.000000s [Cpu=0.0%] G4WT0 > Run Summary G4WT0 > Number of events processed : 77 G4WT0 > User=0.000000s Real=0.001415s Sys=0.000000s [Cpu=0.0%] Run terminated. Run Summary Number of events processed : 100 User=0.020000s Real=0.029526s Sys=0.000000s [Cpu=67.7%]

I am running a macro, Heather and I modified to simulate a single solid SiLi detector. The histograms are also empty even when I run large events. See the attached[https://res-geo.cdn.office.net/assets/mail/file-icon/png/generic_16x16.png]Cedar.machttps://triumfoffice365-my.sharepoint.com/:u:/g/personal/aavaa_triumf_ca/EbvtR3xyBv5NjJlsIocBEqIBNzWUzn4obqJF59jXF0l0Mg. Though even with the spice.mac which is in the example_simulations gave the same problem.

Thanks you for you response.

Abraham


From: Vinzenz Bildstein @.> Sent: Tuesday, March 14, 2023 11:50 AM To: GRIFFINCollaboration/detectorSimulations_v10 @.> Cc: Abraham Aungwa Avaa @.>; Author @.> Subject: Re: [GRIFFINCollaboration/detectorSimulations_v10] G4Exception (Issue #83)

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That sounds like the compiling part works, as that is not a compiler error, but an error running the simulation.

The first warning that you get is exactly what it says. It seems you are trying to run a macro that visualizes a setup, but you haven't specified that setup at all.

The other warnings are saying that a file is already open. I don't know why you are getting these warnings, but they are warnings, not errors, so maybe everything is okay? What does the output look like? And what macro are you running?

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VinzenzBildstein commented 1 year ago

You might want to check the discussion in #82 then if you are using the same macro.

Do the other examples (like the 60Co one) work for you though?

Abi-12308 commented 1 year ago

Hi,

60Co example did not even ran.


From: Vinzenz Bildstein @.> Sent: Tuesday, March 14, 2023 12:37 PM To: GRIFFINCollaboration/detectorSimulations_v10 @.> Cc: Abraham Aungwa Avaa @.>; Author @.> Subject: Re: [GRIFFINCollaboration/detectorSimulations_v10] G4Exception (Issue #83)

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You might want to check the discussion in #82https://can01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FGRIFFINCollaboration%2FdetectorSimulations_v10%2Fissues%2F82&data=05%7C01%7Caavaa%40triumf.ca%7Ca1ef75b423ca479c544c08db24c38841%7Cc20535109cb34679a2d38f442e03b587%7C1%7C0%7C638144194440605325%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=7DNMd5O%2FVtwpcBcDwMj93FGi8fustD3japSbJfUbNeM%3D&reserved=0 then if you are using the same macro.

Do the other examples (like the 60Co one) work for you though?

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VinzenzBildstein commented 1 year ago

What output/error does the 60Co example produce? Can you post the full terminal output that you get when you run that macron inside the Co60_griffin_plus_full_structure directory?

Abi-12308 commented 1 year ago

Here is the output, for reasons, which I cannot explain, it ran now though, it took almost 40 minutes to run 10000 events.

G4VisManager: Using G4TrajectoryDrawByCharge as fallback trajectory model. See commands in /vis/modeling/trajectories/ for other options.

Run 0 starts.

Run 0 start.

1130 daughter volumes G4WT1 > /run/verbose 1 G4WT1 > /event/verbose 0 G4WT0 > /run/verbose 1 G4WT1 > /tracking/verbose 0 G4WT0 > /event/verbose 0 G4WT1 > /gun/particle ion G4WT0 > /tracking/verbose 0 G4WT0 > /gun/particle ion G4WT1 > /gun/ion 27 60 G4WT0 > /gun/ion 27 60 G4WT1 > /grdm/nucleusLimits 60 60 27 27 G4WT1 > -------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : HAD_RDM_671 issued by : G4RadioactiveDecayBaseMessenger This command is valid but deprecated and will be replaced with the command: /process/had/rdm/nucleusLimits in the next major release, Geant4 version 11.0 This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

G4WT1 > /run/physicsModified G4WT0 > /grdm/nucleusLimits 60 60 27 27 G4WT0 > -------- WWWW ------- G4Exception-START -------- WWWW ------- G4Exception : HAD_RDM_671 issued by : G4RadioactiveDecayBaseMessenger This command is valid but deprecated and will be replaced with the command: /process/had/rdm/nucleusLimits in the next major release, Geant4 version 11.0 This is just a warning message. *** -------- WWWW -------- G4Exception-END --------- WWWW -------

G4WT0 > /run/physicsModified G4WT0 > ### Run 0 starts on worker thread 0. G4WT0 > ### Run 0 start. G4WT1 > ### Run 0 starts on worker thread 1. G4WT0 > ---> Begin of event: 0 G4WT1 > ---> Begin of event: 1000 G4WT1 > ---> Begin of event: 2000 G4WT1 > ---> Begin of event: 3000 G4WT1 > ---> Begin of event: 4000 G4WT1 > ---> Begin of event: 5000 G4WT0 > ---> Begin of event: 6000 G4WT1 > ---> Begin of event: 7000 G4WT0 > ---> Begin of event: 8000 G4WT0 > ---> Begin of event: 9000 G4WT1 > Thread-local run terminated. G4WT1 > Run Summary G4WT1 > Number of events processed : 4970 G4WT1 > User=2188.320000s Real=1100.520677s Sys=2.940000s [Cpu=199.1%] G4WT0 > Thread-local run terminated. G4WT0 > Run Summary G4WT0 > Number of events processed : 5030 G4WT0 > User=2188.740000s Real=1100.927497s Sys=2.950000s [Cpu=199.1%] Run terminated. Run Summary Number of events processed : 10000 User=2189.060000s Real=1105.239563s Sys=3.250000s [Cpu=198.4%] 0 events have been kept for refreshing and/or reviewing. "/vis/reviewKeptEvents" to review them one by one. "/vis/enable", then "/vis/viewer/flush" or "/vis/viewer/rebuild" to see them accumulated. Graphics systems deleted. Visualization Manager deleting... G4WT1 > Destroying WorkerRunManager (0x7f7908048830) G4WT1 > G4 kernel has come to Quit state. G4WT0 > Destroying WorkerRunManager (0x7f7910048830) G4WT0 > G4 kernel has come to Quit state. G4WT1 > ================== Deleting memory pools =================== G4WT0 > ================== Deleting memory pools =================== G4WT1 > Number of memory pools allocated: 10; of which, static: 0 G4WT1 > Dynamic pools deleted: 10 / Total memory freed: 2.7 MB G4WT1 > ============================================================ G4WT1 > Thread-local UImanager is to be deleted. G4WT1 > There should not be any thread-local G4cout/G4cerr hereafter. G4WT0 > Number of memory pools allocated: 10; of which, static: 0 G4WT0 > Dynamic pools deleted: 10 / Total memory freed: 2.7 MB G4WT0 > ============================================================ G4WT0 > Thread-local UImanager is to be deleted. G4WT0 > There should not be any thread-local G4cout/G4cerr hereafter. G4 kernel has come to Quit state. ================== Deleting memory pools =================== Number of memory pools allocated: 3; of which, static: 0 Dynamic pools deleted: 3 / Total memory freed: 0.0048 MB

RunManagerKernel is deleted. Good bye :)


From: Vinzenz Bildstein @.> Sent: Tuesday, March 14, 2023 1:02 PM To: GRIFFINCollaboration/detectorSimulations_v10 @.> Cc: Abraham Aungwa Avaa @.>; Author @.> Subject: Re: [GRIFFINCollaboration/detectorSimulations_v10] G4Exception (Issue #83)

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What output/error does the 60Co example produce? Can you post the full terminal output that you get when you run that macron inside the Co60_griffin_plus_full_structure directory?

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Abi-12308 commented 1 year ago

Hi, is it possible to edit the "DetectionSystemPaces" file to have only a single solid silicon with no holders, then create a macro to run it? I need help with this.

Abraham


From: Vinzenz Bildstein @.> Sent: Tuesday, March 14, 2023 1:02 PM To: GRIFFINCollaboration/detectorSimulations_v10 @.> Cc: Abraham Aungwa Avaa @.>; Author @.> Subject: Re: [GRIFFINCollaboration/detectorSimulations_v10] G4Exception (Issue #83)

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What output/error does the 60Co example produce? Can you post the full terminal output that you get when you run that macron inside the Co60_griffin_plus_full_structure directory?

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jsmallcombe commented 1 year ago

Yes it is possible. See attached. Abraham.zip

Abi-12308 commented 1 year ago

Thank you James. It worked nicely. I tried the visualization but it I could not see anything. I reduced the number of events to 100 but did not succeed.


From: James Smallcombe @.> Sent: Wednesday, March 15, 2023 12:04 AM To: GRIFFINCollaboration/detectorSimulations_v10 @.> Cc: Abraham Aungwa Avaa @.>; Author @.> Subject: Re: [GRIFFINCollaboration/detectorSimulations_v10] G4Exception (Issue #83)

Yes it is possible. See attached. Abraham.ziphttps://can01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FGRIFFINCollaboration%2FdetectorSimulations_v10%2Ffiles%2F10976846%2FAbraham.zip&data=05%7C01%7Caavaa%40triumf.ca%7Cd57bba620b0b4a632f8108db25237b64%7Cc20535109cb34679a2d38f442e03b587%7C1%7C0%7C638144608771463575%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000%7C%7C%7C&sdata=K7m8x8bJqzcOwWrt98Ia%2F%2BMG5qy0ebrPBo2gOU14j0Q%3D&reserved=0

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jsmallcombe commented 1 year ago

Here's a simple vis.mac that should show something. As this is no longer your original issue, and there is no problem with the group source code, I suggest marking this issue as resolved and opening another issue (or just emailing) if you have further specific issues.

/control/verbose 2
/run/verbose 2
/run/initialize

/DetSys/det/addPaces 1

/vis/open OGL
/vis/viewer/set/style surface
/vis/drawVolume
/vis/scene/add/trajectories smooth
/vis/scene/endOfEventAction accumulate

/DetSys/gun/particle e-
/DetSys/gun/efficiencyEnergy 500 keV

/run/beamOn 100
Abi-12308 commented 1 year ago

Thanks to James and Vinzenz for resolving my issue.