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GavinHaLab
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ichorCNA
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
GNU General Public License v3.0
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Possible typo in wiki
#24
EfraMP
opened
1 month ago
0
In params.tx file, Log-likelihood gets set to NA
#23
benbfly
opened
3 months ago
0
Error in quantile.default, missing values not allowed
#22
ekushele
opened
6 months ago
0
Format Imports
#21
istvankleijn
closed
3 months ago
4
dependencies missing comma
#20
abcoxyzide
closed
3 months ago
0
Plotting alternate solutions, segments, and other outputs.
#19
teacakedeadlift
opened
8 months ago
0
In what situations should maxGenomeSubclonal and maxCnaSubclonal be reconsidered?
#18
ilykos
opened
9 months ago
0
could the ichorCNA be used for gDNA
#17
feihongloveworld
opened
9 months ago
0
Change dependency to require R-4.2
#16
ycl6
closed
11 months ago
1
Allow mapWig & repTimeWig to be optional
#15
ycl6
closed
11 months ago
0
Broken CLI : runIchorCNA.R: line 50: Syntaxerror
#14
sroener
opened
1 year ago
7
ichorCNA Cromwell-WDL workflow development
#13
gavinha
opened
1 year ago
0
Question mark after attaching packages in run_ichorCNA
#12
ekushele
opened
1 year ago
2
GenomeInfoDb
#11
teacakedeadlift
opened
1 year ago
5
Clarify documentation on calling versus tumor fraction estimation
#10
lbeltrame
opened
2 years ago
3
Update R and some slight adjustments
#9
vortexing
closed
1 year ago
0
PR merge and release to allow for dockerization
#8
vortexing
closed
1 year ago
1
Git version cannot be installed
#7
lbeltrame
closed
2 years ago
1
use fread instead of read.delim
#6
mjko1210
closed
3 years ago
0
add repTime wig files
#5
mjko1210
closed
3 years ago
0
fix params
#4
mjko1210
closed
3 years ago
0
Update DESCRIPTION
#3
robertamezquita
closed
1 year ago
3
Change vector to list
#2
mjko1210
closed
4 years ago
0
Implement sex config change
#1
mjko1210
closed
4 years ago
0