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GeneAssembly / biosal

biosal is a distributed BIOlogical Sequence Actor Library. THIS IS A MIRROR.
BSD 2-Clause "Simplified" License
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analyze tracepoints between the 2 last reports (10 second window) #825

Closed sebhtml closed 10 years ago

sebhtml commented 10 years ago

Report A:

thorium_worker_pool: node/1020 EPOCH LOAD 820 s 9.36/15 (0.62) 0.52 0.70 0.76 0.81 0.78 0.73 0.47 0.64 0.48 0.60 0.55 0.46 0.54 0.69 0.64 thorium_worker_pool: node/1020 EPOCH FUTURE_TIMELINE 820 s 2 0 0 0 1 0 1 0 0 0 1 1 0 1 1 thorium_worker_pool: node/1020 EPOCH WAKE_UP_COUNT 820 s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TRACEPOINT memory:free pointer= 0x19d7750000 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 458 key= 0x533932bf TRACEPOINT memory:free pointer= 0x19d77501c0 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 459 key= 0x533932bf TRACEPOINT memory:free pointer= 0x19d7750380 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 460 key= 0x533932bf thorium_node: node/1020 METRICS AliveActorCount: 61 ByteCount: 16580083712 / 17163091968

Report B:

thorium_worker_pool: node/1020 EPOCH LOAD 830 s 11.17/15 (0.74) 0.99 0.83 0.61 0.60 0.76 0.54 0.99 0.64 0.79 0.72 0.92 0.59 0.76 0.77 0.65 thorium_worker_pool: node/1020 EPOCH FUTURE_TIMELINE 830 s 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 thorium_worker_pool: node/1020 EPOCH WAKE_UP_COUNT 830 s 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 TRACEPOINT memory:free pointer= 0x19d7750380 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 458 key= 0x533932bf TRACEPOINT memory:free pointer= 0x19d77501c0 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 459 key= 0x533932bf TRACEPOINT memory:free pointer= 0x19d7750000 function= thorium_worker_pool_print_load file= engine/thorium/worker_pool.c line= 460 key= 0x533932bf thorium_node: node/1020 METRICS AliveActorCount: 61 ByteCount: 16898850816 / 17163091968

sebhtml commented 10 years ago

see #824

sebhtml commented 10 years ago

thorium_actor_active_message_limit returns 1

sebhtml commented 10 years ago

[boisvert@cetuslac1 automated-tests]$ grep allocate spate-2014-11-19-02-24-12-3.01020.txt-tp|wc -l 430 [boisvert@cetuslac1 automated-tests]$ grep free spate-2014-11-19-02-24-12-3.01020.txt-tp|wc -l 10

[boisvert@cetuslac1 automated-tests]$ grep allocate spate-2014-11-19-02-24-12-3.01020.txt-tp|awk '{print $4}'|sort|uniq -c 207 1048576 3 2097152 210 24 3 420 7 8388608

with key 0x1d4f2792.

assuming kmer size of 27, that is

sebhtml commented 10 years ago

Conclusion: increase chunk size for classifiers