Gregor-Mendel-Institute GWA-Portal issues

Gregor-Mendel-Institute / GWA-Portal

Web-app to store an display GWAS studies

gwas.gmi.oeaw.ac.at

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Build(deps): Bump postgresql from 9.4-1201-jdbc41 to 42.3.7 in /src/genophenbrowser-server

#209 dependabot[bot] opened 1 year ago
0
CVE-2021-22135 API information disclosure flaw in Elasticsearch

#208 imhunterand opened 2 years ago
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CVE-2013-5960 Missing Cryptographic Step in OWASP Enterprise Security API for Java

#207 imhunterand opened 2 years ago
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CVE-2017-5929 Deserialization of Untrusted Data

#206 imhunterand opened 2 years ago
0
Build(deps): Bump esapi from 2.1.0 to 2.3.0.0 in /src/genophenbrowser-server

#205 dependabot[bot] opened 2 years ago
0
Build(deps): Bump postgresql from 9.4-1201-jdbc41 to 42.2.25 in /src/genophenbrowser-server

#204 dependabot[bot] closed 1 year ago
1
Build(deps): Bump elasticsearch from 2.1.1 to 6.8.17 in /src/genophenbrowser-server

#203 dependabot[bot] opened 3 years ago
0
Build(deps): Bump elasticsearch from 2.1.1 to 6.8.15 in /src/genophenbrowser-server

#202 dependabot[bot] closed 3 years ago
1
Build(deps): Bump jetty-servlets from 9.4.28.v20200408 to 9.4.41.v20210516 in /src

#201 dependabot[bot] opened 3 years ago
0
Build(deps): Bump logback-classic from 1.1.5 to 1.2.0 in /src

#200 dependabot[bot] opened 3 years ago
0
Build(deps): Bump junit from 4.12 to 4.13.1 in /src

#199 dependabot[bot] opened 3 years ago
0
Build(deps): Bump hibernate-validator from 4.1.0.Final to 5.3.5.Final in /src/genophenbrowser-client

#198 dependabot[bot] opened 4 years ago
0
Refactor

#197 timeu closed 4 years ago
0
SNP View minor allele counts are wrong

#196 timeu opened 5 years ago
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Scrollbars missing in SNP detail view (candlestick chart)

#195 timeu opened 5 years ago
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REST endpoint to batch create GWAS analysis for multiple phenotypes

#194 timeu opened 6 years ago
0
Hard to select SNPs that are at the beginning or end of a chromosome

#193 timeu opened 6 years ago
0
allocationSize = 1 missing for publication entity

#192 timeu opened 6 years ago
1
Modify statistics endpoint to work with PyGWAS 1.7.0

#191 timeu opened 7 years ago
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Remove transformation from phenotypedata REST endpoint

#190 timeu opened 7 years ago
1
Enrichment analysis: Running list is empty even tough jobs are running

#189 timeu opened 7 years ago
0
Enrichment analysis: facet for Running does not display correct number (always 0)

#188 timeu opened 7 years ago
0
Wrong URL for QQ plots for GWASViewer

#187 timeu opened 7 years ago
0
Download of pvalues as csv is missing some records

#186 timeu closed 7 years ago
1
QQ plots in GWASViewer are not correct

#185 timeu opened 7 years ago
0
Display gene track not working

#184 timeu opened 7 years ago
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Deleting old Ionomics Study causes SQL Exception

#183 timeu opened 7 years ago
1
Coul not parse meta-data when adding DOI

#182 timeu opened 7 years ago
0
Add support to import AraPheno phenotypes

#181 timeu opened 7 years ago
0
Add Option to SNPViewer to only display the SNPs that are available in the chosen dataset

#180 timeu opened 7 years ago
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Change URL for gene information

#179 timeu closed 7 years ago
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Download of pvalues as csv is missing GVE

#178 timeu closed 7 years ago
0
Better Manhattan plots

#177 timeu opened 7 years ago
1
Fix LD backend

#176 timeu closed 7 years ago
1
Export of ISA-TAB is broken

#175 timeu opened 8 years ago
1
Add support for downloading and displaying QQPlots

#174 timeu closed 7 years ago
0
Wrong number of chromosomes in plotting

#173 timeu closed 7 years ago
0
Split up backend into microservices

#172 timeu opened 8 years ago
0
For replicates display statistics in Phenotype Explorer and wizard

#171 timeu opened 8 years ago
0
Make sure to set the title for each page

#170 timeu opened 8 years ago
0
Upload URL for attaching a GWAS study to an analysis is wrong

#169 timeu closed 8 years ago
0
Make sure to use correct autofill attributes for sign in and register

#168 timeu closed 7 years ago
0
Make it possible to sort by ID in GWASViewer

#167 timeu opened 8 years ago
0
Allows to batch edit unit of measure of phenotypes in a study

#166 timeu opened 8 years ago
0
Gene information popup is not visible on Chromosome 5

#165 timeu opened 8 years ago
0
tooltip on phenotype wizard does not work

#164 timeu closed 8 years ago
0
Overlap of swedish genomes does not work

#163 timeu closed 8 years ago
0
Make JBrowseChrTrack lookup more robust

#162 timeu opened 8 years ago
0
Downloading pvalue files and uploading should work without changing anything

#161 timeu closed 8 years ago
0
Meta-analysis gene view

#160 timeu closed 8 years ago
1