Sarcomere Detection and Contraction Analysis
Step 1: 'dwProcessFrame' to test parameters
Step 2: fix parameters in 'dwProcessVideo'
Step 3: 'dwProcessFolder' on a folder with one or two movies
Step 4: 'dwCheckResults' on outputs from step 3; adjust parameters and run again if necessary
Step 5: 'dwProcessFolder' on folder with arbitrary number of movies
Step 6: 'dwAggegateTables' on folders whose tables are to be aggregated
Sample dataset: https://www.dropbox.com/s/k1p65tnfeixp9q0/SarcTrackSampleVideos.zip?dl=0
To generate and analyze synthetic movies, as well as to understand the code, see dwGenerateSynthMovie.m, dwProcessSynthFrame.m, and dwProcessSynthMovie.m