HudsonAlpha fmlrc2 issues

HudsonAlpha / fmlrc2

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issues

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ERROR fmlrc2] Invalid record while parsing long read file: ParseError { msg: "invalid gzip header", kind: Io, position: ErrorPosition { line: 0, id: None }, format: None }

#35 ytt01 closed 3 months ago
2
The fmlrc2 used with racon

#34 ld9866 closed 7 months ago
2
Feature request- Number of changes made as part of output

#33 zacksaud closed 9 months ago
4
Shortend read length after running FMLRC2

#32 juheon closed 10 months ago
2
error: Found argument '79' which wasn't expected, or isn't valid in this context

#31 bsb2014 closed 1 year ago
2
"error: Found argument '21' which wasn't expected, or isn't valid in this context" When attempting FMLRC2 in Eukaryote Mode

#30 jwalewski closed 1 year ago
2
fixes unnecessary casts and borrows

#29 holtjma closed 1 year ago
0
please show an example of how to provide multiple kmers

#28 rjsorr closed 2 years ago
4
update URLs to fmlrc2

#27 holtjma closed 2 years ago
0
Wfa edit dist

#26 holtjma closed 2 years ago
1
Custom edit distance

#25 holtjma closed 2 years ago
0
[Question] Split => correct => re-join

#24 tuannguyen8390 closed 2 years ago
2
About self-correction of ONT

#23 Johnsonzcode closed 2 years ago
3
Readme minor update

#22 holtjma closed 2 years ago
1
Question about replicates

#21 majdabdul closed 2 years ago
4
How do I update FMLRC2

#20 cement-head closed 2 years ago
1
HiC --> pacbio CLR

#19 Johnsonzcode closed 2 years ago
5
Can fmlrc2 applied to long reads transcriptome?

#18 gouwei1 closed 2 years ago
0
Memory consumption

#17 Akazhiel closed 2 years ago
6
Index generation

#16 Akazhiel closed 3 years ago
3
No error if '-k=21,33,41,59,79' cannot get parsed

#15 mmokrejs closed 3 years ago
4
fmlrc2: thread 'main' panicked at 'index out of bounds: the len is 0 but the index is ...

#14 mmokrejs closed 3 years ago
3
CI & LTO

#13 holtjma closed 3 years ago
0
Do heterozygous variants remain in long reads after correction?

#12 Yutang-ETH closed 3 years ago
10
Invalid record while parsing long read file

#11 maepz closed 3 years ago
2
Interleave bitvec

#10 holtjma closed 3 years ago
2
Any plan to include fmlrc2 in Conda?

#9 fanavarro closed 3 years ago
3
installation (dependency) issue from cargo test --release

#8 pdimens closed 3 years ago
2
About ideal short read coverage, -m -f parameters, r1 and r2 of paired-end input, 3-pass correction and Nanopore data correction

#7 romseg closed 3 years ago
9
Bitvector updates

#6 holtjma closed 3 years ago
0
Correct Nanopore long reads with Pacbio HiFi reads

#5 Johnsonzcode closed 3 years ago
10
Correct Nanopore reads

#4 Johnsonzcode closed 3 years ago
1
installation error

#3 pezhmansafdari closed 3 years ago
1
Bwt input checks

#2 holtjma closed 4 years ago
0
run error

#1 Johnsonzcode closed 4 years ago
16