HuttleyLab / DiverseSeq

Tools for analysis of sequence divergence
BSD 3-Clause "New" or "Revised" License
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ENH: provide mash distance as a standalone app #52

Open GavinHuttley opened 2 months ago

GavinHuttley commented 2 months ago

The mash distance is useful, although perhaps it should be dvs_dists with the choice of euclidean or mash? In either case, the app should take c3_types.SeqsCollectionType as the input type and return c3_types.PairwiseDistanceType.

It should run in serial only.