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IAmSuyogJadhav / 3d-mri-brain-tumor-segmentation-using-autoencoder-regularization

Keras implementation of the paper "3D MRI brain tumor segmentation using autoencoder regularization" by Myronenko A. (https://arxiv.org/abs/1810.11654).
MIT License
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could anyone please help regarding this error? #36

Closed srinivasb72s1 closed 4 years ago

srinivasb72s1 commented 4 years ago

I have executed the given example on google colab. I changed the working directory into the working directory. using the following code:

import os os.chdir("/content/drive/My Drive/Colab Notebooks/3d-mri-brain-tumor-segmentation-using-autoencoder-regularization-master") that working directory having the following files: Brats_2018 model.py pycache testing.ipynb group_norm.py NVDLMED_Implementation.ipynb README.md

when extract the datadet from below code import zipfile # For faster extraction dataset_path = "/Brats_2018/MICCAI_BraTS_2018_Data_Training.zip"
zfile = zipfile.ZipFile(dataset_path) zfile.extractall()

error here is FileNotFoundError Traceback (most recent call last)

in () 1 import zipfile # For faster extraction 2 dataset_path = "/Brats_2018/MICCAI_BraTS_2018_Data_Training.zip" ----> 3 zfile = zipfile.ZipFile(dataset_path) 4 zfile.extractall() /usr/lib/python3.6/zipfile.py in __init__(self, file, mode, compression, allowZip64) 1111 while True: 1112 try: -> 1113 self.fp = io.open(file, filemode) 1114 except OSError: 1115 if filemode in modeDict: FileNotFoundError: [Errno 2] No such file or directory: '/Brats_2018/MICCAI_BraTS_2018_Data_Training.zip' how to give datapath? please help me thanking you.
jayurbain commented 4 years ago

Make sure your files are located at your datapath:

!ls -l dataset_path