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JLSteenwyk
/
PhyKIT
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
https://jlsteenwyk.com/PhyKIT/
MIT License
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ImportError: cannot import name 'false_discovery_control' from 'scipy.stats'
#40
zhangrengang
opened
4 weeks ago
4
Efficient
#39
JLSteenwyk
closed
2 months ago
0
Phykit `thread_dna` with the log of Clipkit gives alignments of different lengths
#38
MarionPerrier
closed
3 months ago
7
Bump certifi from 2024.6.2 to 2024.7.4 in /docs
#37
dependabot[bot]
opened
4 months ago
0
Bump urllib3 from 2.2.1 to 2.2.2 in /docs
#36
dependabot[bot]
opened
5 months ago
0
Saturation value exceeded the expected range
#35
Dreamening
closed
5 months ago
1
enhancement: bipartition support stats
#34
JLSteenwyk
closed
5 months ago
1
enhancement: faidx
#33
JLSteenwyk
closed
5 months ago
1
Update python version
#32
JLSteenwyk
closed
5 months ago
0
Bump requests from 2.31.0 to 2.32.0 in /docs
#31
dependabot[bot]
closed
5 months ago
1
Bump jinja2 from 3.1.3 to 3.1.4 in /docs
#30
dependabot[bot]
closed
6 months ago
0
Dna thread
#29
JLSteenwyk
closed
8 months ago
0
ValueError: x and y must have length at least 2.
#28
chun-he-316
closed
8 months ago
12
Recode
#27
JLSteenwyk
closed
9 months ago
0
Recode
#26
JLSteenwyk
closed
9 months ago
0
Enhancement: Dna thread
#25
JLSteenwyk
closed
9 months ago
0
added rcvt and removed deprecated functions in thread_dna
#24
JLSteenwyk
closed
9 months ago
0
Update python version
#23
JLSteenwyk
closed
11 months ago
0
simplified the reporting of results for the hidden paralogy check fun…
#22
JLSteenwyk
closed
11 months ago
0
added additional line breaks for clarity in hidden paralogy check docs
#21
JLSteenwyk
closed
11 months ago
0
Update python version
#20
JLSteenwyk
closed
11 months ago
0
fixed docs error that removed everything after the dvmc function
#19
JLSteenwyk
closed
11 months ago
0
removed the use of the root.txt file from the DVMC function
#18
JLSteenwyk
closed
11 months ago
0
Update python version
#17
JLSteenwyk
closed
1 year ago
0
Update python version
#16
JLSteenwyk
closed
1 year ago
0
Saturation calculation error?
#15
ymilesz
closed
1 year ago
3
Bump certifi from 2020.12.5 to 2023.7.22 in /docs
#14
dependabot[bot]
closed
1 year ago
1
Bump scipy from 1.4.1 to 1.10.0
#13
dependabot[bot]
closed
1 year ago
1
Bump requests from 2.25.1 to 2.31.0 in /docs
#12
dependabot[bot]
closed
1 year ago
1
Can gene-gene covariation relationships be calculated for orthologous gene families？
#11
XXboop
closed
1 year ago
1
Bump certifi from 2020.12.5 to 2022.12.7 in /docs
#10
dependabot[bot]
closed
1 year ago
1
typo - copy the blm function name properly
#9
hyphaltip
closed
2 years ago
0
concatenate issue
#8
hverbruggen
closed
2 years ago
1
Bump babel from 2.9.0 to 2.9.1 in /docs
#7
dependabot[bot]
closed
2 years ago
1
create_concat: AttributeError: 'str' object has no attribute 'decode'
#6
TobyBaril
closed
3 years ago
4
Bump urllib3 from 1.26.4 to 1.26.5 in /docs
#5
dependabot[bot]
closed
3 years ago
1
Bump pygments from 2.6.1 to 2.7.4 in /docs
#4
dependabot[bot]
closed
3 years ago
2
Bump pyyaml from 5.3.1 to 5.4 in /docs
#3
dependabot[bot]
closed
3 years ago
0
Bump jinja2 from 2.11.2 to 2.11.3 in /docs
#2
dependabot[bot]
closed
3 years ago
1
Create base tree class and port internode_labeler
#1
TJBIII
closed
4 years ago
0