JiekaiLab / scTE

MIT License
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How scTE infers TEs from scRNA-seq #78

Closed swainasish closed 7 months ago

swainasish commented 9 months ago

Hello, Thank you for building this great tool. I am new to the single-cell domain. Could you please explain how scTE infers TEs from scRNA-seq data, given that RNA-seq data only contain transcription information in the cell? Additionally, could you please let me know what the ideal input is for finding cell-type-specific TEs: scRNA-seq or scATAC-seq?