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JoRussell-IDM / updated_infection_and_immunity

malaria_two_pt_oh
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Make the width of gaussian wave shapes configurable #38

Open JoRussell-IDM opened 5 years ago

JoRussell-IDM commented 5 years ago

Related to the TM/PPP scale factor debugging, it would be helpful to make configurable the width of the antigenic wave gaussian shapes that are appended to infections when choosing next peak height, so that individuals are still able to achieve realistic high densities (on order of 10^4 to 10^3) but the surrounding days/weeks arent all too high as well, giving reasonable timescales on which to sample submicroscopic density (as in Garki data).

This param is in line 268 of InfectionMalaria2.cpp

        density += wave_peak_value * gaussian_pdf(time, wave_peak_time, FLOAT TO MAKE CONFIGURABLE);