Open zkamvar opened 10 years ago
Part 1 of this has been implemented in commit 3bca8ab44f6ee8959ab29eab13cf85925affde34 with unit tests in commit d10566eceb021f2c2219638b45f3ca4473ce4f60
Part 2 has not yet been implemented. I'll comment here again when it's complete.
Minor changes have been added in commit e5101197fddb0ca5a1c536ffd70af281ed4c1b06 These changes allow for tie breaks in single population msns, as well as expanded unit tests and consistency between functions.
Minimum spanning networks in poppr are currently implemented in
bruvo.msn
andpoppr.msn
using the igraph package. I have two requests for these networks:mlg.filter
where assigned multilocus genotypes are either clustered together in the same node or highlighted in a meaningful fasion.