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KennthShang / PhaBOX

Local version of the virus identification and analysis web server (tool set)
https://phage.ee.cityu.edu.hk/
Academic Free License v3.0
37 stars 5 forks source link

Check exit codes of external programs #35

Closed bernt-matthias closed 2 weeks ago

bernt-matthias commented 2 weeks ago

It would be great if the code could check the exit code of external program calls, e.g. here and phabox return a non-zero exit code in case one of the calls fails.

KennthShang commented 2 weeks ago

Thanks for the advice. I will update this in the future version.

Best, Jiayu

KennthShang commented 2 weeks ago

I have updated the codes with the latest release version 2.1.4.

In addition, I set up a new pull request for PhaBOX 2.1.4 to Bioconda #51958.

Because I always got a problem during the test: [Errno 28] No space left on device. I decide to remove all the stand-alone packages from the receipt and let the users install them independently. Hope it will work this time.

Best, Jiayu

KennthShang commented 2 weeks ago

I finally passed the check and thanks for your approval and guidance! Many thanks!

Best, Jiayu