Closed rdguerrerom closed 2 years ago
Hi,
After following the steps that you recommend to install the package, I got the following errors:
Downloading trained model to Trained_models/60/forward ... ... done downloading trained model! Archive: STOUT_trained_models_v2.1.zip creating: Trained_models/ creating: Trained_models/60/ creating: Trained_models/60/forward/ inflating: Trained_models/60/forward/ckpt-1.data-00000-of-00001 inflating: Trained_models/60/forward/ckpt-1.index inflating: Trained_models/60/forward/checkpoint creating: Trained_models/60/reverse/ inflating: Trained_models/60/reverse/ckpt-1.data-00000-of-00001 inflating: Trained_models/60/reverse/ckpt-1.index inflating: Trained_models/60/reverse/checkpoint creating: Trained_models/30/ creating: Trained_models/30/forward/ inflating: Trained_models/30/forward/ckpt-1.data-00000-of-00001 inflating: Trained_models/30/forward/ckpt-1.index inflating: Trained_models/30/forward/checkpoint creating: Trained_models/30/reverse/ inflating: Trained_models/30/reverse/ckpt-1.data-00000-of-00001 inflating: Trained_models/30/reverse/ckpt-1.index inflating: Trained_models/30/reverse/checkpoint Traceback (most recent call last): File "STOUT_V_2.1.py", line 303, in <module> main() File "STOUT_V_2.1.py", line 50, in main iupac_name = translate(selfies.encoder(canonical_smiles.decode('utf-8').strip()).replace("][","] [")) File "STOUT_V_2.1.py", line 167, in translate result, sentence = evaluate(sentence) File "STOUT_V_2.1.py", line 133, in evaluate inputs = [inp_lang.word_index[i] for i in sentence.split(' ')] File "STOUT_V_2.1.py", line 133, in <listcomp> inputs = [inp_lang.word_index[i] for i in sentence.split(' ')] KeyError: '[Branch1]'
Hello @rdguerrerom ,
I guess you installed the latest version of SELFIES, they made some changes with the tokens. please remove it and install selfies v1.0.4.
pip install selfies==1.0.4
-Kohulan
Hi,
After following the steps that you recommend to install the package, I got the following errors: