KoslickiLab / mutation-rate-ci-calculator

This software calculates a confidence interval for the mutation rate from a set of observed containment indices under a simple nucleotide mutation process.
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Intervals do not match exactly with Mathematica implementation #1

Closed mahmudhera closed 3 years ago

mahmudhera commented 3 years ago

Perhaps need to consider more precise spicy solvers

mahmudhera commented 3 years ago

Checking closely with mpf in python, it seems that python implementation results are closer to zero. Therefore, this issue is being closed.