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KratosMultiphysics / Kratos

Kratos Multiphysics (A.K.A Kratos) is a framework for building parallel multi-disciplinary simulation software. Modularity, extensibility and HPC are the main objectives. Kratos has BSD license and is written in C++ with extensive Python interface.
https://kratosmultiphysics.github.io/Kratos/
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Fluid and CompressiblePotentialFlow not compiling in Windows #5681

Closed jginternational closed 4 years ago

jginternational commented 4 years ago

image

Probably related with the kratos api thing #5525

marcnunezc commented 4 years ago

Hi @jginternational, I added one missing call to Kratos API in #5683 in the potential flow (in compute_embedded_lift_process). As for the other processes, I am not sure what is the cause

jcotela commented 4 years ago

@jginternational I cannot reproduce the errors from Fluid in the current master, not even if I compile the CompressiblePotentialFlow too. Are you compiling some other application dependent on Fluid?

jginternational commented 4 years ago

@jcotela My configure.bat looks like:

del CMakeCache.txt

cmake -G "Visual Studio 16 2019" -A x64                                              ^
-DCMAKE_BUILD_TYPE=Release                                                          ^
-DCMAKE_CXX_FLAGS=" -D_SCL_SECURE_NO_WARNINGS "                                     ^
-DBOOST_ROOT="E:\PROYECTOS\Boost\boost_1_66_0"                                                      ^
-DLAPACK_LIBRARIES="E:\PROYECTOS\LibsPack64\liblapack.lib"                            ^
-DPYTHON_EXECUTABLE="E:\Python\python.exe"                            ^
-DBLAS_LIBRARIES="E:\PROYECTOS\LibsPack64\libblas.lib"                                ^
-DMESHING_APPLICATION=ON                                                            ^
-DEXTERNAL_SOLVERS_APPLICATION=ON                                                   ^
-DSOLID_MECHANICS_APPLICATION=ON                                                    ^
-DCONSTITUTIVE_MODELS_APPLICATION=ON                                                         ^
-DSTRUCTURAL_MECHANICS_APPLICATION=ON                                                         ^
-DCONTACT_MECHANICS_APPLICATION=ON                                                         ^
-DCONTACT_STRUCTURAL_MECHANICS_APPLICATION=ON                                                         ^
-DEIGEN_SOLVERS_APPLICATION=ON                                                         ^
-DEIGEN_ROOT="E:\PROYECTOS\Eigen"                                                         ^
-DPARTICLE_MECHANICS_APPLICATION=ON                                                         ^
-DMAPPING_APPLICATION=ON                                                         ^
-DEMPIRE_APPLICATION=ON                                                         ^
-DCOMPRESSIBLE_POTENTIAL_FLOW_APPLICATION=ON                                               ^
-DCONVECTION_DIFFUSION_APPLICATION=ON                                               ^
-DFLUID_DYNAMICS_APPLICATION=ON                                                     ^
-DMESH_MOVING_APPLICATION=ON                                                                ^
-DDELAUNAY_MESHING_APPLICATION=ON                                                                ^
-DPFEM_APPLICATION=ON                                                                ^
-DPFEM_SOLID_MECHANICS_APPLICATION=ON                                                                ^
-DPFEM_FLUID_DYNAMICS_APPLICATION=ON                                                                ^
-DFSI_APPLICATION=ON                                                                ^
-DDEM_APPLICATION=ON                                                               ^
-DSWIMMING_DEM_APPLICATION=ON                                                      ^
-DINSTALL_PYTHON_FILES=ON                                                           ^
-DINSTALL_EMBEDDED_PYTHON=ON                                                        ^
-DKRATOS_BUILD_TESTING=OFF                                                    ^
-DKRATOS_INSTALL_PREFIX="E:\KratosDeploy"                                                    ^
..

Only happens in windows. I'm trying it now in a clean machine

rubenzorrilla commented 4 years ago

Could you please try compiling only the FluidDynamicsApplication? (without the CompressiblePotentialFlowApplication)

jginternational commented 4 years ago

It compiled for FluidDynamics on it's own (disabling the Compressible Potential Flow)

Now (since todays PR) this happens also for Structural Mechanics @KratosMultiphysics/structural-mechanics 


1>------ Build started: Project: KratosStructuralMechanicsCore, Configuration: Release x64 ------
1>Building Custom Rule E:/PROYECTOS/Kratos/applications/StructuralMechanicsApplication/CMakeLists.txt
1>CMake does not need to re-run because E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/CMakeFiles/generate.stamp is up-to-date.
1>   Creating library E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/Release/KratosStructuralMechanicsCore.lib and object E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/Release/KratosStructuralMechanicsCore.exp
1>structural_mechanics_application.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::CalculateStressDisplacementDerivative(class Kratos::Variable<class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > > const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculateStressDisplacementDerivative@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@UEAAXAEBV?$Variable@V?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@ublas@numeric@boost@@@2@AEAV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEBVProcessInfo@2@@Z)
1>structural_mechanics_application.obj : error LNK2001: unresolved external symbol "public: virtual int __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::Check(class Kratos::ProcessInfo const &)" (?Check@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@UEAAHAEBVProcessInfo@2@@Z)
1>structural_mechanics_application.obj : error LNK2019: unresolved external symbol "private: virtual void __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::save(class Kratos::Serializer &)const " (?save@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@EEBAXAEAVSerializer@2@@Z) referenced in function "[thunk]:private: virtual void __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::save`adjustor{16}' (class Kratos::Serializer &)const " (?save@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@GBA@EBAXAEAVSerializer@2@@Z)
1>structural_mechanics_application.obj : error LNK2019: unresolved external symbol "private: virtual void __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::load(class Kratos::Serializer &)" (?load@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@EEAAXAEAVSerializer@2@@Z) referenced in function "[thunk]:private: virtual void __cdecl Kratos::AdjointFiniteDifferencingSmallDisplacementElement<class Kratos::SmallDisplacement>::load`adjustor{16}' (class Kratos::Serializer &)" (?load@?$AdjointFiniteDifferencingSmallDisplacementElement@VSmallDisplacement@Kratos@@@Kratos@@GBA@EAAXAEAVSerializer@2@@Z)
1>E:\PROYECTOS\Kratos\cmake_build\applications\StructuralMechanicsApplication\Release\KratosStructuralMechanicsCore.dll : fatal error LNK1120: 4 unresolved externals
1>Done building project "KratosStructuralMechanicsCore.vcxproj" -- FAILED.
2>------ Build started: Project: KratosStructuralMechanicsApplication, Configuration: Release x64 ------
2>Building Custom Rule E:/PROYECTOS/Kratos/applications/StructuralMechanicsApplication/CMakeLists.txt
2>CMake does not need to re-run because E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/CMakeFiles/generate.stamp is up-to-date.
2>   Creating library E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/Release/KratosStructuralMechanicsApplication.lib and object E:/PROYECTOS/Kratos/cmake_build/applications/StructuralMechanicsApplication/Release/KratosStructuralMechanicsApplication.exp
2>add_custom_response_functions_to_python.obj : error LNK2019: unresolved external symbol "__declspec(dllimport) public: __cdecl Kratos::AdjointMaxStressResponseFunction::AdjointMaxStressResponseFunction(class Kratos::ModelPart &,class Kratos::Parameters)" (__imp_??0AdjointMaxStressResponseFunction@Kratos@@QEAA@AEAVModelPart@1@VParameters@1@@Z) referenced in function "public: class pybind11::handle __cdecl <lambda_667106dddf4f721698341743ae4d674a>::operator()(struct pybind11::detail::function_call &)const " (??R<lambda_667106dddf4f721698341743ae4d674a>@@QEBA?AVhandle@pybind11@@AEAUfunction_call@detail@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual __cdecl Kratos::AdjointMaxStressResponseFunction::~AdjointMaxStressResponseFunction(void)" (__imp_??1AdjointMaxStressResponseFunction@Kratos@@UEAA@XZ) referenced in function "public: virtual void * __cdecl Kratos::AdjointMaxStressResponseFunction::`scalar deleting destructor'(unsigned int)" (??_GAdjointMaxStressResponseFunction@Kratos@@UEAAPEAXI@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointMaxStressResponseFunction::CalculateGradient(class Kratos::Element const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > const &,class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculateGradient@AdjointMaxStressResponseFunction@Kratos@@UEAAXAEBVElement@2@AEBV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEAV?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@567@AEBVProcessInfo@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointMaxStressResponseFunction::CalculatePartialSensitivity(class Kratos::Condition &,class Kratos::Variable<double> const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > const &,class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculatePartialSensitivity@AdjointMaxStressResponseFunction@Kratos@@UEAAXAEAVCondition@2@AEBV?$Variable@N@2@AEBV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEAV?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@678@AEBVProcessInfo@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointMaxStressResponseFunction::CalculatePartialSensitivity(class Kratos::Condition &,class Kratos::Variable<class Kratos::array_1d<double,3> > const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > const &,class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculatePartialSensitivity@AdjointMaxStressResponseFunction@Kratos@@UEAAXAEAVCondition@2@AEBV?$Variable@V?$array_1d@N$02@Kratos@@@2@AEBV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEAV?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@678@AEBVProcessInfo@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointMaxStressResponseFunction::CalculatePartialSensitivity(class Kratos::Element &,class Kratos::Variable<double> const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > const &,class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculatePartialSensitivity@AdjointMaxStressResponseFunction@Kratos@@UEAAXAEAVElement@2@AEBV?$Variable@N@2@AEBV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEAV?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@678@AEBVProcessInfo@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::AdjointMaxStressResponseFunction::CalculatePartialSensitivity(class Kratos::Element &,class Kratos::Variable<class Kratos::array_1d<double,3> > const &,class boost::numeric::ublas::matrix<double,struct boost::numeric::ublas::basic_row_major<unsigned __int64,__int64>,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > const &,class boost::numeric::ublas::vector<double,class boost::numeric::ublas::unbounded_array<double,class std::allocator<double> > > &,class Kratos::ProcessInfo const &)" (?CalculatePartialSensitivity@AdjointMaxStressResponseFunction@Kratos@@UEAAXAEAVElement@2@AEBV?$Variable@V?$array_1d@N$02@Kratos@@@2@AEBV?$matrix@NU?$basic_row_major@_K_J@ublas@numeric@boost@@V?$unbounded_array@NV?$allocator@N@std@@@234@@ublas@numeric@boost@@AEAV?$vector@NV?$unbounded_array@NV?$allocator@N@std@@@ublas@numeric@boost@@@678@AEBVProcessInfo@2@@Z)
2>add_custom_response_functions_to_python.obj : error LNK2001: unresolved external symbol "public: virtual double __cdecl Kratos::AdjointMaxStressResponseFunction::CalculateValue(class Kratos::ModelPart &)" (?CalculateValue@AdjointMaxStressResponseFunction@Kratos@@UEAANAEAVModelPart@2@@Z)
2>E:\PROYECTOS\Kratos\cmake_build\applications\StructuralMechanicsApplication\Release\KratosStructuralMechanicsApplication.pyd : fatal error LNK1120: 8 unresolved externals
2>Done building project "KratosStructuralMechanicsApplication.vcxproj" -- FAILED.
========== Build: 0 succeeded, 2 failed, 5 up-to-date, 0 skipped ==========
AlejandroCornejo commented 4 years ago

It happens something similar in Win with the Meshing App...

philbucher commented 4 years ago

@dbaumgaertner

dbaumgaertner commented 4 years ago

That is strange, as I tried it yesterday on Windows and did not have any issues. I will look into it and comment here on any updates.

dbaumgaertner commented 4 years ago

@jginternational @philbucher Regarding the linking problem arising from the StructuralMechanicsApp. I tried a compilation of the latest master on Windows and it runs through without any issues. So, unfortunately, I can not reproduce the error. Obviously, also the continuous integration did not complain.

Does somebody else also observe this problem? Just to see if it is a systematic error.

@jginternational Which VisualStudio are you using and which build type?

jginternational commented 4 years ago

@dbaumgaertner The structural issue is no longer happening so I think that's been fixed.

The only one that it's still having problems is the Compressible Potential Flow

jginternational commented 4 years ago

This is the current message:


1>------ Build started: Project: KratosCompressiblePotentialFlowCore, Configuration: Release x64 ------
1>Building Custom Rule E:/PROYECTOS/Kratos/applications/CompressiblePotentialFlowApplication/CMakeLists.txt
1>CMake does not need to re-run because E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/CMakeFiles/generate.stamp is up-to-date.
1>   Creating library E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/Release/KratosCompressiblePotentialFlowCore.lib and object E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/Release/KratosCompressiblePotentialFlowCore.exp
1>compute_nodal_potential_flow_velocity_process.obj : error LNK2019: unresolved external symbol "__declspec(dllimport) const Kratos::ComputeNodalPotentialFlowVelocityProcess::`vftable'" (__imp_??_7ComputeNodalPotentialFlowVelocityProcess@Kratos@@6B@) referenced in function "public: __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::ComputeNodalPotentialFlowVelocityProcess(class Kratos::ModelPart &)" (??0ComputeNodalPotentialFlowVelocityProcess@Kratos@@QEAA@AEAVModelPart@1@@Z)
1>E:\PROYECTOS\Kratos\cmake_build\applications\CompressiblePotentialFlowApplication\Release\KratosCompressiblePotentialFlowCore.dll : fatal error LNK1120: 1 unresolved externals
1>Done building project "KratosCompressiblePotentialFlowCore.vcxproj" -- FAILED.
2>------ Build started: Project: KratosCompressiblePotentialFlowApplication, Configuration: Release x64 ------
2>Building Custom Rule E:/PROYECTOS/Kratos/applications/CompressiblePotentialFlowApplication/CMakeLists.txt
2>CMake does not need to re-run because E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/CMakeFiles/generate.stamp is up-to-date.
2>   Creating library E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/Release/KratosCompressiblePotentialFlowApplication.lib and object E:/PROYECTOS/Kratos/cmake_build/applications/CompressiblePotentialFlowApplication/Release/KratosCompressiblePotentialFlowApplication.exp
2>add_custom_processes_to_python.obj : error LNK2019: unresolved external symbol "__declspec(dllimport) public: virtual __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::~ComputeNodalPotentialFlowVelocityProcess(void)" (__imp_??1ComputeNodalPotentialFlowVelocityProcess@Kratos@@UEAA@XZ) referenced in function "public: virtual void * __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::`scalar deleting destructor'(unsigned int)" (??_GComputeNodalPotentialFlowVelocityProcess@Kratos@@UEAAPEAXI@Z)
2>add_custom_processes_to_python.obj : error LNK2001: unresolved external symbol "public: virtual class std::basic_string<char,struct std::char_traits<char>,class std::allocator<char> > __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::Info(void)const " (?Info@ComputeNodalPotentialFlowVelocityProcess@Kratos@@UEBA?AV?$basic_string@DU?$char_traits@D@std@@V?$allocator@D@2@@std@@XZ)
2>add_custom_processes_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::PrintData(class std::basic_ostream<char,struct std::char_traits<char> > &)const " (?PrintData@ComputeNodalPotentialFlowVelocityProcess@Kratos@@UEBAXAEAV?$basic_ostream@DU?$char_traits@D@std@@@std@@@Z)
2>add_custom_processes_to_python.obj : error LNK2001: unresolved external symbol "public: virtual void __cdecl Kratos::ComputeNodalPotentialFlowVelocityProcess::PrintInfo(class std::basic_ostream<char,struct std::char_traits<char> > &)const " (?PrintInfo@ComputeNodalPotentialFlowVelocityProcess@Kratos@@UEBAXAEAV?$basic_ostream@DU?$char_traits@D@std@@@std@@@Z)
2>E:\PROYECTOS\Kratos\cmake_build\applications\CompressiblePotentialFlowApplication\Release\KratosCompressiblePotentialFlowApplication.pyd : fatal error LNK1120: 4 unresolved externals
2>Done building project "KratosCompressiblePotentialFlowApplication.vcxproj" -- FAILED.
========== Build: 0 succeeded, 2 failed, 6 up-to-date, 0 skipped ==========
jginternational commented 4 years ago

Maybe @roigcarlo can bring some light

marcnunezc commented 4 years ago

@jginternational #5757 should fix the compilation error