Closed evanroyrees closed 2 years ago
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit 42f7920
+| ✅ 63 tests passed |+
#| ❔ 34 tests were ignored |#
!| ❗ 8 tests had warnings |!
Merging #234 (42f7920) into main (5779edd) will decrease coverage by
0.04%
. The diff coverage isn/a
.
@@ Coverage Diff @@
## main #234 +/- ##
==========================================
- Coverage 27.68% 27.64% -0.05%
==========================================
Files 45 45
Lines 5339 5336 -3
==========================================
- Hits 1478 1475 -3
Misses 3861 3861
Flag | Coverage Δ | |
---|---|---|
unittests | 27.64% <ø> (-0.05%) |
:arrow_down: |
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Impacted Files | Coverage Δ | |
---|---|---|
autometa/common/utilities.py | 22.15% <0.00%> (-0.49%) |
:arrow_down: |
autometa/binning/unclustered_recruitment.py | 91.84% <0.00%> (-0.09%) |
:arrow_down: |
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:fire: remove
requirements.txt
:fire: Remove bioconda recipemeta.yaml
:memo: Update docs fornextflow-env.yml
:arrow_up: Renameenvironment.yml
tonextflow-env.yml
:arrow_up: Addautometa-env.yml
(conda env) to replacerequirements.txt
(pip requirements file) :art: ChangeMakefile create_environment
command to useautometa-env.yml
:memo: Change installation directions to correspond toautometa-env.yml
rather thanrequirements.txt