search

LTS5 / cmp_nipype

This repository is meant to host a beta version for the future release of the ConnectomeMapper.
Other
13 stars 5 forks source link

fsl.Orient doesn't exist #21

Closed MarcRamos closed 10 years ago

MarcRamos commented 10 years ago

Hello! I have installed the new connectomemapper in two computers and I get the same error. src_conv = fsl.Orient(in_file=src_file, get_orient=True).run().outputs.orient AttributeError: 'module' object has no attribute 'Orient' Interface SwapAndReorient failed to run.

I can load the library from python In [2]: import nipype.interfaces.fsl as fsl In [3]: And if I try to fsl. and tab to list the options, .Orient doesn't appear. Where is the problem?

Thanks! Marc.

MarcRamos commented 10 years ago

In one computer I found fsl.Orient, and cmp2 works fine there, so maybe something was not correctly installed previously in the other ones.

davidrs06 commented 10 years ago

Try reinstalling our forked version of nipype in the computer where you get the error

MarcRamos commented 10 years ago

Yes, thanks it worked.