Currently Laniakea is using by default CentOS7, with python 3.6.
Galaxy 22.01 requires python >3.7.
Galaxy release_22.01 is currently failing on Laniakea v3.
TASK [galaxyproject.galaxy : Install Galaxy base dependencies] ***************** Thursday 24 March 2022 15:30:19.338374 fatal: [90.147.75.145_0]: FAILED! => {"changed": false, "cmd": ["/home/galaxy/galaxy/venv/bin/pip", "install", "--index-url", "https://wheels.galaxyproject.org/simple/", "--extra-index-url", "https://pypi.python.org/simple", "-r", "/home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt"], "msg": "stdout: Looking in indexes: https://wheels.galaxyproject.org/simple/, https://pypi.python.org/simple, https://wheels.galaxyproject.org/simple\nIgnoring amqp: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring anyio: markers 'python_version >= \"3.7\" and python_full_version >= \"3.6.2\"' don't match your environment\nIgnoring asgiref: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring attrs: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" or python_full_version >= \"3.5.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring billiard: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring bx-python: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring cachecontrol: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring cached-property: markers 'python_version < \"3.8\" and python_version >= \"3.7\"' don't match your environment\nIgnoring celery: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring cffi: markers 'implementation_name == \"pypy\" and python_version >= \"3.6\"' don't match your environment\nIgnoring click-didyoumean: markers 'python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring click-plugins: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring click-repl: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring click: markers 'python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring colorama: markers 'platform_system == \"Windows\" and python_version >= \"3.7\" and python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and (python_version >= \"2.7\" and python_full_version < \"3.0.0\" and platform_system == \"Windows\" or python_full_version >= \"3.5.0\" and platform_system == \"Windows\")' don't match your environment\nIgnoring h11: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring h5py: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring idna: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring importlib-metadata: markers 'python_version == \"3.7\" and (python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"3.8\" or python_full_version >= \"3.6.0\" and python_version < \"3.8\" and python_version >= \"3.7\")' don't match your environment\nIgnoring isodate: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring jsonschema: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring kombu: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring lockfile: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring mistune: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring msgpack: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring numpy: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring prompt-toolkit: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\"' don't match your environment\nIgnoring py: markers 'python_version >= \"3.6\" and python_full_version < \"3.0.0\" and implementation_name == \"pypy\" or implementation_name == \"pypy\" and python_version >= \"3.6\" and python_full_version >= \"3.5.0\"' don't match your environment\nIgnoring pycparser: markers 'python_version >= \"3.6\" and python_full_version < \"3.0.0\" and implementation_name == \"pypy\" or implementation_name == \"pypy\" and python_version >= \"3.6\" and python_full_version >= \"3.4.0\"' don't match your environment\nIgnoring pyreadline3: markers 'sys_platform == \"win32\" and python_version >= \"3.8\" and (python_version >= \"3.6\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_version >= \"3.6\" and python_version < \"4\" and python_full_version >= \"3.5.0\")' don't match your environment\nIgnoring pyreadline: markers 'sys_platform == \"win32\" and python_version < \"3.8\" and (python_version >= \"3.6\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_version >= \"3.6\" and python_version < \"4\" and python_full_version >= \"3.5.0\")' don't match your environment\nIgnoring pyrsistent: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring pytz: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" or python_full_version >= \"3.5.0\" and python_version < \"4\" and python_version >= \"3.7\"' don't match your environment\nIgnoring rdflib: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring ruamel.yaml: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring schema-salad: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring six: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_full_version >= \"3.3.0\" and python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring sniffio: markers 'python_version >= \"3.7\" and python_full_version >= \"3.6.2\"' don't match your environment\nIgnoring starlette-context: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring tifffile: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring uvicorn: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring uvloop: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring vine: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring wcwidth: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\"' don't match your environment\nIgnoring zipp: markers 'python_version == \"3.7\" and (python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"3.8\" or python_full_version >= \"3.6.0\" and python_version < \"3.8\" and python_version >= \"3.7\")' don't match your environment\nCollecting a2wsgi==1.4.0\n Using cached a2wsgi-1.4.0-py3-none-any.whl (11 kB)\nCollecting adal==1.2.7\n Using cached adal-1.2.7-py2.py3-none-any.whl (55 kB)\nCollecting aiofiles==0.8.0\n Using cached aiofiles-0.8.0-py3-none-any.whl (13 kB)\nCollecting appdirs==1.4.4\n Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)\nCollecting argcomplete==2.0.0\n Using cached argcomplete-2.0.0-py2.py3-none-any.whl (37 kB)\nCollecting attmap==0.13.2\n Using cached attmap-0.13.2-py3-none-any.whl (12 kB)\nCollecting babel==2.9.1\n Using cached Babel-2.9.1-py2.py3-none-any.whl (8.8 MB)\nCollecting bagit-profile==1.3.1\n Using cached bagit_profile-1.3.1-py3-none-any.whl (14 kB)\nCollecting bagit==1.8.1\n Using cached bagit-1.8.1-py2.py3-none-any.whl (35 kB)\nCollecting bcrypt==3.2.0\n Using cached bcrypt-3.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (61 kB)\nCollecting bdbag==1.6.3\n Using cached bdbag-1.6.3-py2.py3-none-any.whl (70 kB)\nCollecting beaker==1.11.0\n Using cached Beaker-1.11.0.tar.gz (40 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting bioblend==0.16.0\n Using cached bioblend-0.16.0-py2.py3-none-any.whl (12.5 MB)\nCollecting bleach==4.1.0\n Using cached bleach-4.1.0-py2.py3-none-any.whl (157 kB)\nCollecting boltons==21.0.0\n Using cached boltons-21.0.0-py2.py3-none-any.whl (193 kB)\nCollecting boto==2.49.0\n Using cached boto-2.49.0-py2.py3-none-any.whl (1.4 MB)\nCollecting certifi==2021.10.8\n Using cached certifi-2021.10.8-py2.py3-none-any.whl (149 kB)\nCollecting charset-normalizer==2.0.11\n Using cached charset_normalizer-2.0.11-py3-none-any.whl (39 kB)\nCollecting cheetah3==3.2.6.post1\n Using cached Cheetah3-3.2.6.post1-cp36-cp36m-manylinux1_x86_64.whl (673 kB)\nCollecting circus==0.17.1\n Using cached circus-0.17.1-py3-none-any.whl (182 kB)\nCollecting cloudauthz==0.6.0\n Using cached cloudauthz-0.6.0-py2.py3-none-any.whl (8.9 kB)\nCollecting cloudbridge==3.0.0\n Using cached cloudbridge-3.0.0-py2.py3-none-any.whl (193 kB)\nCollecting coloredlogs==15.0.1\n Using cached coloredlogs-15.0.1-py2.py3-none-any.whl (46 kB)\nCollecting commonmark==0.9.1\n Using cached commonmark-0.9.1-py2.py3-none-any.whl (51 kB)\nCollecting cryptography==36.0.1\n Using cached cryptography-36.0.1-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (3.8 MB)\nCollecting cwltool==3.1.20211107152837\n Using cached cwltool-3.1.20211107152837-py3-none-any.whl (1.2 MB)\nCollecting decorator==5.1.1\n Using cached decorator-5.1.1-py3-none-any.whl (9.1 kB)\nCollecting defusedxml==0.7.1\n Using cached defusedxml-0.7.1-py2.py3-none-any.whl (25 kB)\nCollecting deprecation==2.1.0\n Using cached deprecation-2.1.0-py2.py3-none-any.whl (11 kB)\nCollecting dictobj==0.4\n Using cached dictobj-0.4.tar.gz (6.9 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting docopt==0.6.2\n Using cached https://wheels.galaxyproject.org/simple/docopt/docopt-0.6.2-py2.py3-none-any.whl (19 kB)\nCollecting docutils==0.16\n Using cached docutils-0.16-py2.py3-none-any.whl (548 kB)\nCollecting ecdsa==0.17.0\n Using cached ecdsa-0.17.0-py2.py3-none-any.whl (119 kB)\nCollecting edam-ontology==1.25.2\n Using cached edam_ontology-1.25.2-py2.py3-none-any.whl (262 kB)\nCollecting fabric3==1.14.post1\n Using cached Fabric3-1.14.post1-py3-none-any.whl (92 kB)\nCollecting fastapi-utils==0.2.1\n Using cached fastapi_utils-0.2.1-py3-none-any.whl (16 kB)\nCollecting fastapi==0.73.0\n Using cached fastapi-0.73.0-py3-none-any.whl (52 kB)\nCollecting fs==2.4.14\n Using cached fs-2.4.14-py2.py3-none-any.whl (133 kB)\nCollecting funcsigs==1.0.2\n Using cached funcsigs-1.0.2-py2.py3-none-any.whl (17 kB)\nCollecting future==0.18.2\n Using cached future-0.18.2.tar.gz (829 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting galaxy-sequence-utils==1.1.5\n Using cached galaxy_sequence_utils-1.1.5-py2.py3-none-any.whl (37 kB)\nCollecting gravity==0.11.0\n Using cached gravity-0.11.0-py3-none-any.whl (36 kB)\nCollecting greenlet==1.1.2\n Using cached greenlet-1.1.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB)\nCollecting gunicorn==20.1.0\n Using cached gunicorn-20.1.0-py3-none-any.whl (79 kB)\nCollecting gxformat2==0.15.0\n Using cached gxformat2-0.15.0-py2.py3-none-any.whl (49 kB)\nCollecting humanfriendly==10.0\n Using cached humanfriendly-10.0-py2.py3-none-any.whl (86 kB)\nCollecting importlib-resources==5.4.0\n Using cached importlib_resources-5.4.0-py3-none-any.whl (28 kB)\nCollecting isa-rwval==0.10.10\n Using cached isa_rwval-0.10.10-py2.py3-none-any.whl (50 kB)\nCollecting lagom==1.7.0\n Using cached lagom-1.7.0-py2.py3-none-any.whl (31 kB)\nCollecting lxml==4.7.1\n Using cached lxml-4.7.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (6.4 MB)\nCollecting mako==1.1.6\n Using cached Mako-1.1.6-py2.py3-none-any.whl (75 kB)\nCollecting markdown==3.3.6\n Using cached Markdown-3.3.6-py3-none-any.whl (97 kB)\nCollecting markupsafe==2.0.1\n Using cached MarkupSafe-2.0.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (30 kB)\nCollecting mercurial==6.0.1\n Using cached mercurial-6.0.1.tar.gz (8.1 MB)\n Installing build dependencies: started\n Installing build dependencies: finished with status 'done'\n Getting requirements to build wheel: started\n Getting requirements to build wheel: finished with status 'done'\n Preparing metadata (pyproject.toml): started\n Preparing metadata (pyproject.toml): finished with status 'done'\nCollecting mrcfile==1.3.0\n Using cached mrcfile-1.3.0-py2.py3-none-any.whl (40 kB)\nCollecting mypy-extensions==0.4.3\n Using cached mypy_extensions-0.4.3-py2.py3-none-any.whl (4.5 kB)\nCollecting networkx==2.5\n Using cached networkx-2.5-py3-none-any.whl (1.6 MB)\nCollecting nodeenv==1.6.0\n Using cached nodeenv-1.6.0-py2.py3-none-any.whl (21 kB)\nCollecting nose==1.3.7\n Using cached nose-1.3.7-py3-none-any.whl (154 kB)\nCollecting oauthlib==3.2.0\n Using cached oauthlib-3.2.0-py3-none-any.whl (151 kB)\nCollecting oyaml==1.0\n Using cached oyaml-1.0-py2.py3-none-any.whl (3.0 kB)\nCollecting packaging==21.3\n Using cached packaging-21.3-py3-none-any.whl (40 kB)\nCollecting paramiko==2.9.2\n Using cached paramiko-2.9.2-py2.py3-none-any.whl (210 kB)\nCollecting parsley==1.3\n Using cached Parsley-1.3-py2.py3-none-any.whl (88 kB)\nCollecting paste==3.5.0\n Using cached Paste-3.5.0-py2.py3-none-any.whl (593 kB)\nCollecting pastedeploy==2.1.1\n Using cached PasteDeploy-2.1.1-py2.py3-none-any.whl (17 kB)\nCollecting pbr==5.8.0\n Using cached pbr-5.8.0-py2.py3-none-any.whl (112 kB)\nCollecting prov==1.5.1\n Using cached prov-1.5.1-py2.py3-none-any.whl (426 kB)\nCollecting psutil==5.9.0\n Using cached psutil-5.9.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (279 kB)\nCollecting pulsar-galaxy-lib==0.14.13\n Using cached pulsar_galaxy_lib-0.14.13-py2.py3-none-any.whl (185 kB)\nCollecting pyasn1==0.4.8\n Using cached pyasn1-0.4.8-py2.py3-none-any.whl (77 kB)\nCollecting pycryptodome==3.14.0\n Using cached pycryptodome-3.14.0-cp35-abi3-manylinux2010_x86_64.whl (2.0 MB)\nCollecting pydantic==1.9.0\n Using cached pydantic-1.9.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (11.0 MB)\nCollecting pydot==1.4.2\n Using cached pydot-1.4.2-py2.py3-none-any.whl (21 kB)\nCollecting pyeventsystem==0.1.0\n Using cached pyeventsystem-0.1.0-py2.py3-none-any.whl (15 kB)\nCollecting pyfaidx==0.6.3.1\n Using cached pyfaidx-0.6.3.1.tar.gz (101 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting pygments==2.11.2\n Using cached Pygments-2.11.2-py3-none-any.whl (1.1 MB)\nCollecting pyjwt==2.3.0\n Using cached PyJWT-2.3.0-py3-none-any.whl (16 kB)\nCollecting pykwalify==1.8.0\n Using cached pykwalify-1.8.0-py2.py3-none-any.whl (24 kB)\nCollecting pynacl==1.5.0\n Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.1 MB)\nCollecting pyparsing==3.0.7\n Using cached pyparsing-3.0.7-py3-none-any.whl (98 kB)\nCollecting pysam==0.18.0\n Using cached pysam-0.18.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.0 MB)\nCollecting python-dateutil==2.8.2\n Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)\nCollecting python-jose==3.3.0\n Using cached python_jose-3.3.0-py2.py3-none-any.whl (33 kB)\nCollecting python-multipart==0.0.5\n Using cached python-multipart-0.0.5.tar.gz (32 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting python3-openid==3.2.0\n Using cached python3_openid-3.2.0-py3-none-any.whl (133 kB)\nCollecting pyuwsgi==2.0.20\n Using cached pyuwsgi-2.0.20-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (935 kB)\nCollecting pyyaml==6.0\n Using cached PyYAML-6.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (603 kB)\nCollecting pyzmq==22.3.0\n Using cached pyzmq-22.3.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (1.1 MB)\nCollecting refgenconf==0.12.2\n Using cached refgenconf-0.12.2-py3-none-any.whl (72 kB)\nCollecting repoze.lru==0.7\n Using cached repoze.lru-0.7-py3-none-any.whl (10 kB)\nCollecting requests-oauthlib==1.3.1\n Using cached requests_oauthlib-1.3.1-py2.py3-none-any.whl (23 kB)\nCollecting requests-toolbelt==0.9.1\n Using cached requests_toolbelt-0.9.1-py2.py3-none-any.whl (54 kB)\nCollecting requests==2.27.1\n Using cached requests-2.27.1-py2.py3-none-any.whl (63 kB)\nCollecting rich==11.1.0\n Using cached rich-11.1.0-py3-none-any.whl (216 kB)\nCollecting routes==2.5.1\n Using cached Routes-2.5.1-py2.py3-none-any.whl (40 kB)\nCollecting rsa==4.8\n Using cached rsa-4.8-py3-none-any.whl (39 kB)\nCollecting ruamel.yaml.clib==0.2.6\n Using cached ruamel.yaml.clib-0.2.6-cp36-cp36m-manylinux1_x86_64.whl (552 kB)\nCollecting setuptools-scm==5.0.2\n Using cached setuptools_scm-5.0.2-py2.py3-none-any.whl (29 kB)\nCollecting shellescape==3.8.1\n Using cached shellescape-3.8.1-py2.py3-none-any.whl (3.1 kB)\nCollecting social-auth-core==4.0.3\n Using cached social_auth_core-4.0.3-py3-none-any.whl (328 kB)\nCollecting sortedcontainers==2.4.0\n Using cached sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)\nCollecting sqlalchemy-migrate==0.13.0\n Using cached sqlalchemy_migrate-0.13.0-py2.py3-none-any.whl (109 kB)\nCollecting sqlalchemy==1.4.31\n Using cached SQLAlchemy-1.4.31-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.6 MB)\nCollecting sqlitedict==1.7.0\n Using cached sqlitedict-1.7.0.tar.gz (28 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting sqlparse==0.4.2\n Using cached sqlparse-0.4.2-py3-none-any.whl (42 kB)\nCollecting starlette==0.17.1\n Using cached starlette-0.17.1-py3-none-any.whl (58 kB)\nCollecting supervisor==4.2.4\n Using cached supervisor-4.2.4-py2.py3-none-any.whl (749 kB)\nCollecting svgwrite==1.4.1\n Using cached svgwrite-1.4.1-py3-none-any.whl (66 kB)\nCollecting tempita==0.5.2\n Using cached Tempita-0.5.2-py3-none-any.whl (12 kB)\nCollecting tenacity==8.0.1\n Using cached tenacity-8.0.1-py3-none-any.whl (24 kB)\nCollecting tornado==6.1\n Using cached tornado-6.1-cp36-cp36m-manylinux2010_x86_64.whl (427 kB)\nCollecting tqdm==4.62.3\n Using cached tqdm-4.62.3-py2.py3-none-any.whl (76 kB)\nCollecting tuswsgi==0.5.4\n Using cached tuswsgi-0.5.4-py2.py3-none-any.whl (6.8 kB)\nCollecting typing-extensions==4.0.1\n Using cached typing_extensions-4.0.1-py3-none-any.whl (22 kB)\nCollecting tzlocal==2.1\n Using cached tzlocal-2.1-py2.py3-none-any.whl (16 kB)\nCollecting ubiquerg==0.6.2\n Using cached ubiquerg-0.6.2-py2.py3-none-any.whl (13 kB)\nCollecting urllib3==1.26.8\n Using cached urllib3-1.26.8-py2.py3-none-any.whl (138 kB)\nCollecting webencodings==0.5.1\n Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB)\nCollecting webob==1.8.7\n Using cached WebOb-1.8.7-py2.py3-none-any.whl (114 kB)\nCollecting whoosh==2.7.4\n Using cached Whoosh-2.7.4-py2.py3-none-any.whl (468 kB)\nCollecting yacman==0.8.4\n Using cached yacman-0.8.4-py3-none-any.whl (12 kB)\nCollecting zipstream-new==1.1.8\n Using cached zipstream_new-1.1.8-py3-none-any.whl (20 kB)\nCollecting importlib-metadata<5,>=0.23\n Using cached importlib_metadata-4.8.3-py3-none-any.whl (17 kB)\nCollecting pytz>=2015.7\n Using cached pytz-2022.1-py2.py3-none-any.whl (503 kB)\nCollecting six>=1.4.1\n Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)\nCollecting cffi>=1.1\n Using cached cffi-1.15.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (405 kB)\nCollecting schema-salad<9,>=8.2.20211104054942\n Using cached schema_salad-8.2.20211222191353-py3-none-any.whl (511 kB)\nRequirement already satisfied: setuptools in /home/galaxy/galaxy/venv/lib/python3.6/site-packages (from cwltool==3.1.20211107152837->-r /home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt (line 43)) (59.6.0)\nCollecting ruamel.yaml<0.17.18,>=0.15\n Using cached ruamel.yaml-0.17.17-py3-none-any.whl (109 kB)\nINFO: pip is looking at multiple versions of cryptography to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of commonmark to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of coloredlogs to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cloudbridge to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cloudauthz to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of circus to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cheetah3 to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of charset-normalizer to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of certifi to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of boto to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of boltons to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bleach to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bioblend to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of beaker to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bdbag to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bcrypt to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bagit to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bagit-profile to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of babel to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of attmap to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of argcomplete to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of appdirs to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of aiofiles to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of adal to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of a2wsgi to determine which version is compatible with other requirements. This could take a while.\n\nThe conflict is caused by:\n The user requested pyparsing==3.0.7\n cwltool 3.1.20211107152837 depends on pyparsing!=3.0.2\n cwltool 3.1.20211107152837 depends on pyparsing<3; python_version <= \"3.6\"\n\nTo fix this you could try to:\n1. loosen the range of package versions you've specified\n2. remove package versions to allow pip attempt to solve the dependency conflict\n\n\n:stderr: ERROR: Cannot install -r /home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt (line 43) and pyparsing==3.0.7 because these package versions have conflicting dependencies.\nERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/user_guide/#fixing-conflicting-dependencies\n"}
Currently Laniakea is using by default CentOS7, with python 3.6. Galaxy 22.01 requires python >3.7. Galaxy release_22.01 is currently failing on Laniakea v3.
TASK [galaxyproject.galaxy : Install Galaxy base dependencies] ***************** Thursday 24 March 2022 15:30:19.338374 fatal: [90.147.75.145_0]: FAILED! => {"changed": false, "cmd": ["/home/galaxy/galaxy/venv/bin/pip", "install", "--index-url", "https://wheels.galaxyproject.org/simple/", "--extra-index-url", "https://pypi.python.org/simple", "-r", "/home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt"], "msg": "stdout: Looking in indexes: https://wheels.galaxyproject.org/simple/, https://pypi.python.org/simple, https://wheels.galaxyproject.org/simple\nIgnoring amqp: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring anyio: markers 'python_version >= \"3.7\" and python_full_version >= \"3.6.2\"' don't match your environment\nIgnoring asgiref: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring attrs: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" or python_full_version >= \"3.5.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring billiard: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring bx-python: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring cachecontrol: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring cached-property: markers 'python_version < \"3.8\" and python_version >= \"3.7\"' don't match your environment\nIgnoring celery: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring cffi: markers 'implementation_name == \"pypy\" and python_version >= \"3.6\"' don't match your environment\nIgnoring click-didyoumean: markers 'python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring click-plugins: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring click-repl: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring click: markers 'python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and python_version >= \"3.7\"' don't match your environment\nIgnoring colorama: markers 'platform_system == \"Windows\" and python_version >= \"3.7\" and python_full_version >= \"3.6.2\" and python_full_version < \"4.0.0\" and (python_version >= \"2.7\" and python_full_version < \"3.0.0\" and platform_system == \"Windows\" or python_full_version >= \"3.5.0\" and platform_system == \"Windows\")' don't match your environment\nIgnoring h11: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring h5py: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring idna: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring importlib-metadata: markers 'python_version == \"3.7\" and (python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"3.8\" or python_full_version >= \"3.6.0\" and python_version < \"3.8\" and python_version >= \"3.7\")' don't match your environment\nIgnoring isodate: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring jsonschema: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring kombu: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring lockfile: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring mistune: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring msgpack: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring numpy: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring prompt-toolkit: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\"' don't match your environment\nIgnoring py: markers 'python_version >= \"3.6\" and python_full_version < \"3.0.0\" and implementation_name == \"pypy\" or implementation_name == \"pypy\" and python_version >= \"3.6\" and python_full_version >= \"3.5.0\"' don't match your environment\nIgnoring pycparser: markers 'python_version >= \"3.6\" and python_full_version < \"3.0.0\" and implementation_name == \"pypy\" or implementation_name == \"pypy\" and python_version >= \"3.6\" and python_full_version >= \"3.4.0\"' don't match your environment\nIgnoring pyreadline3: markers 'sys_platform == \"win32\" and python_version >= \"3.8\" and (python_version >= \"3.6\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_version >= \"3.6\" and python_version < \"4\" and python_full_version >= \"3.5.0\")' don't match your environment\nIgnoring pyreadline: markers 'sys_platform == \"win32\" and python_version < \"3.8\" and (python_version >= \"3.6\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_version >= \"3.6\" and python_version < \"4\" and python_full_version >= \"3.5.0\")' don't match your environment\nIgnoring pyrsistent: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring pytz: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" or python_full_version >= \"3.5.0\" and python_version < \"4\" and python_version >= \"3.7\"' don't match your environment\nIgnoring rdflib: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring ruamel.yaml: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring schema-salad: markers 'python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring six: markers 'python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"4\" or python_full_version >= \"3.3.0\" and python_version >= \"3.7\" and python_version < \"4\"' don't match your environment\nIgnoring sniffio: markers 'python_version >= \"3.7\" and python_full_version >= \"3.6.2\"' don't match your environment\nIgnoring starlette-context: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring tifffile: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring uvicorn: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring uvloop: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring vine: markers 'python_version >= \"3.7\"' don't match your environment\nIgnoring wcwidth: markers 'python_full_version >= \"3.6.2\" and python_version >= \"3.7\"' don't match your environment\nIgnoring zipp: markers 'python_version == \"3.7\" and (python_version >= \"3.7\" and python_full_version < \"3.0.0\" and python_version < \"3.8\" or python_full_version >= \"3.6.0\" and python_version < \"3.8\" and python_version >= \"3.7\")' don't match your environment\nCollecting a2wsgi==1.4.0\n Using cached a2wsgi-1.4.0-py3-none-any.whl (11 kB)\nCollecting adal==1.2.7\n Using cached adal-1.2.7-py2.py3-none-any.whl (55 kB)\nCollecting aiofiles==0.8.0\n Using cached aiofiles-0.8.0-py3-none-any.whl (13 kB)\nCollecting appdirs==1.4.4\n Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)\nCollecting argcomplete==2.0.0\n Using cached argcomplete-2.0.0-py2.py3-none-any.whl (37 kB)\nCollecting attmap==0.13.2\n Using cached attmap-0.13.2-py3-none-any.whl (12 kB)\nCollecting babel==2.9.1\n Using cached Babel-2.9.1-py2.py3-none-any.whl (8.8 MB)\nCollecting bagit-profile==1.3.1\n Using cached bagit_profile-1.3.1-py3-none-any.whl (14 kB)\nCollecting bagit==1.8.1\n Using cached bagit-1.8.1-py2.py3-none-any.whl (35 kB)\nCollecting bcrypt==3.2.0\n Using cached bcrypt-3.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (61 kB)\nCollecting bdbag==1.6.3\n Using cached bdbag-1.6.3-py2.py3-none-any.whl (70 kB)\nCollecting beaker==1.11.0\n Using cached Beaker-1.11.0.tar.gz (40 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting bioblend==0.16.0\n Using cached bioblend-0.16.0-py2.py3-none-any.whl (12.5 MB)\nCollecting bleach==4.1.0\n Using cached bleach-4.1.0-py2.py3-none-any.whl (157 kB)\nCollecting boltons==21.0.0\n Using cached boltons-21.0.0-py2.py3-none-any.whl (193 kB)\nCollecting boto==2.49.0\n Using cached boto-2.49.0-py2.py3-none-any.whl (1.4 MB)\nCollecting certifi==2021.10.8\n Using cached certifi-2021.10.8-py2.py3-none-any.whl (149 kB)\nCollecting charset-normalizer==2.0.11\n Using cached charset_normalizer-2.0.11-py3-none-any.whl (39 kB)\nCollecting cheetah3==3.2.6.post1\n Using cached Cheetah3-3.2.6.post1-cp36-cp36m-manylinux1_x86_64.whl (673 kB)\nCollecting circus==0.17.1\n Using cached circus-0.17.1-py3-none-any.whl (182 kB)\nCollecting cloudauthz==0.6.0\n Using cached cloudauthz-0.6.0-py2.py3-none-any.whl (8.9 kB)\nCollecting cloudbridge==3.0.0\n Using cached cloudbridge-3.0.0-py2.py3-none-any.whl (193 kB)\nCollecting coloredlogs==15.0.1\n Using cached coloredlogs-15.0.1-py2.py3-none-any.whl (46 kB)\nCollecting commonmark==0.9.1\n Using cached commonmark-0.9.1-py2.py3-none-any.whl (51 kB)\nCollecting cryptography==36.0.1\n Using cached cryptography-36.0.1-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (3.8 MB)\nCollecting cwltool==3.1.20211107152837\n Using cached cwltool-3.1.20211107152837-py3-none-any.whl (1.2 MB)\nCollecting decorator==5.1.1\n Using cached decorator-5.1.1-py3-none-any.whl (9.1 kB)\nCollecting defusedxml==0.7.1\n Using cached defusedxml-0.7.1-py2.py3-none-any.whl (25 kB)\nCollecting deprecation==2.1.0\n Using cached deprecation-2.1.0-py2.py3-none-any.whl (11 kB)\nCollecting dictobj==0.4\n Using cached dictobj-0.4.tar.gz (6.9 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting docopt==0.6.2\n Using cached https://wheels.galaxyproject.org/simple/docopt/docopt-0.6.2-py2.py3-none-any.whl (19 kB)\nCollecting docutils==0.16\n Using cached docutils-0.16-py2.py3-none-any.whl (548 kB)\nCollecting ecdsa==0.17.0\n Using cached ecdsa-0.17.0-py2.py3-none-any.whl (119 kB)\nCollecting edam-ontology==1.25.2\n Using cached edam_ontology-1.25.2-py2.py3-none-any.whl (262 kB)\nCollecting fabric3==1.14.post1\n Using cached Fabric3-1.14.post1-py3-none-any.whl (92 kB)\nCollecting fastapi-utils==0.2.1\n Using cached fastapi_utils-0.2.1-py3-none-any.whl (16 kB)\nCollecting fastapi==0.73.0\n Using cached fastapi-0.73.0-py3-none-any.whl (52 kB)\nCollecting fs==2.4.14\n Using cached fs-2.4.14-py2.py3-none-any.whl (133 kB)\nCollecting funcsigs==1.0.2\n Using cached funcsigs-1.0.2-py2.py3-none-any.whl (17 kB)\nCollecting future==0.18.2\n Using cached future-0.18.2.tar.gz (829 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting galaxy-sequence-utils==1.1.5\n Using cached galaxy_sequence_utils-1.1.5-py2.py3-none-any.whl (37 kB)\nCollecting gravity==0.11.0\n Using cached gravity-0.11.0-py3-none-any.whl (36 kB)\nCollecting greenlet==1.1.2\n Using cached greenlet-1.1.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB)\nCollecting gunicorn==20.1.0\n Using cached gunicorn-20.1.0-py3-none-any.whl (79 kB)\nCollecting gxformat2==0.15.0\n Using cached gxformat2-0.15.0-py2.py3-none-any.whl (49 kB)\nCollecting humanfriendly==10.0\n Using cached humanfriendly-10.0-py2.py3-none-any.whl (86 kB)\nCollecting importlib-resources==5.4.0\n Using cached importlib_resources-5.4.0-py3-none-any.whl (28 kB)\nCollecting isa-rwval==0.10.10\n Using cached isa_rwval-0.10.10-py2.py3-none-any.whl (50 kB)\nCollecting lagom==1.7.0\n Using cached lagom-1.7.0-py2.py3-none-any.whl (31 kB)\nCollecting lxml==4.7.1\n Using cached lxml-4.7.1-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (6.4 MB)\nCollecting mako==1.1.6\n Using cached Mako-1.1.6-py2.py3-none-any.whl (75 kB)\nCollecting markdown==3.3.6\n Using cached Markdown-3.3.6-py3-none-any.whl (97 kB)\nCollecting markupsafe==2.0.1\n Using cached MarkupSafe-2.0.1-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (30 kB)\nCollecting mercurial==6.0.1\n Using cached mercurial-6.0.1.tar.gz (8.1 MB)\n Installing build dependencies: started\n Installing build dependencies: finished with status 'done'\n Getting requirements to build wheel: started\n Getting requirements to build wheel: finished with status 'done'\n Preparing metadata (pyproject.toml): started\n Preparing metadata (pyproject.toml): finished with status 'done'\nCollecting mrcfile==1.3.0\n Using cached mrcfile-1.3.0-py2.py3-none-any.whl (40 kB)\nCollecting mypy-extensions==0.4.3\n Using cached mypy_extensions-0.4.3-py2.py3-none-any.whl (4.5 kB)\nCollecting networkx==2.5\n Using cached networkx-2.5-py3-none-any.whl (1.6 MB)\nCollecting nodeenv==1.6.0\n Using cached nodeenv-1.6.0-py2.py3-none-any.whl (21 kB)\nCollecting nose==1.3.7\n Using cached nose-1.3.7-py3-none-any.whl (154 kB)\nCollecting oauthlib==3.2.0\n Using cached oauthlib-3.2.0-py3-none-any.whl (151 kB)\nCollecting oyaml==1.0\n Using cached oyaml-1.0-py2.py3-none-any.whl (3.0 kB)\nCollecting packaging==21.3\n Using cached packaging-21.3-py3-none-any.whl (40 kB)\nCollecting paramiko==2.9.2\n Using cached paramiko-2.9.2-py2.py3-none-any.whl (210 kB)\nCollecting parsley==1.3\n Using cached Parsley-1.3-py2.py3-none-any.whl (88 kB)\nCollecting paste==3.5.0\n Using cached Paste-3.5.0-py2.py3-none-any.whl (593 kB)\nCollecting pastedeploy==2.1.1\n Using cached PasteDeploy-2.1.1-py2.py3-none-any.whl (17 kB)\nCollecting pbr==5.8.0\n Using cached pbr-5.8.0-py2.py3-none-any.whl (112 kB)\nCollecting prov==1.5.1\n Using cached prov-1.5.1-py2.py3-none-any.whl (426 kB)\nCollecting psutil==5.9.0\n Using cached psutil-5.9.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (279 kB)\nCollecting pulsar-galaxy-lib==0.14.13\n Using cached pulsar_galaxy_lib-0.14.13-py2.py3-none-any.whl (185 kB)\nCollecting pyasn1==0.4.8\n Using cached pyasn1-0.4.8-py2.py3-none-any.whl (77 kB)\nCollecting pycryptodome==3.14.0\n Using cached pycryptodome-3.14.0-cp35-abi3-manylinux2010_x86_64.whl (2.0 MB)\nCollecting pydantic==1.9.0\n Using cached pydantic-1.9.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (11.0 MB)\nCollecting pydot==1.4.2\n Using cached pydot-1.4.2-py2.py3-none-any.whl (21 kB)\nCollecting pyeventsystem==0.1.0\n Using cached pyeventsystem-0.1.0-py2.py3-none-any.whl (15 kB)\nCollecting pyfaidx==0.6.3.1\n Using cached pyfaidx-0.6.3.1.tar.gz (101 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting pygments==2.11.2\n Using cached Pygments-2.11.2-py3-none-any.whl (1.1 MB)\nCollecting pyjwt==2.3.0\n Using cached PyJWT-2.3.0-py3-none-any.whl (16 kB)\nCollecting pykwalify==1.8.0\n Using cached pykwalify-1.8.0-py2.py3-none-any.whl (24 kB)\nCollecting pynacl==1.5.0\n Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.1 MB)\nCollecting pyparsing==3.0.7\n Using cached pyparsing-3.0.7-py3-none-any.whl (98 kB)\nCollecting pysam==0.18.0\n Using cached pysam-0.18.0-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (15.0 MB)\nCollecting python-dateutil==2.8.2\n Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)\nCollecting python-jose==3.3.0\n Using cached python_jose-3.3.0-py2.py3-none-any.whl (33 kB)\nCollecting python-multipart==0.0.5\n Using cached python-multipart-0.0.5.tar.gz (32 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting python3-openid==3.2.0\n Using cached python3_openid-3.2.0-py3-none-any.whl (133 kB)\nCollecting pyuwsgi==2.0.20\n Using cached pyuwsgi-2.0.20-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (935 kB)\nCollecting pyyaml==6.0\n Using cached PyYAML-6.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl (603 kB)\nCollecting pyzmq==22.3.0\n Using cached pyzmq-22.3.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (1.1 MB)\nCollecting refgenconf==0.12.2\n Using cached refgenconf-0.12.2-py3-none-any.whl (72 kB)\nCollecting repoze.lru==0.7\n Using cached repoze.lru-0.7-py3-none-any.whl (10 kB)\nCollecting requests-oauthlib==1.3.1\n Using cached requests_oauthlib-1.3.1-py2.py3-none-any.whl (23 kB)\nCollecting requests-toolbelt==0.9.1\n Using cached requests_toolbelt-0.9.1-py2.py3-none-any.whl (54 kB)\nCollecting requests==2.27.1\n Using cached requests-2.27.1-py2.py3-none-any.whl (63 kB)\nCollecting rich==11.1.0\n Using cached rich-11.1.0-py3-none-any.whl (216 kB)\nCollecting routes==2.5.1\n Using cached Routes-2.5.1-py2.py3-none-any.whl (40 kB)\nCollecting rsa==4.8\n Using cached rsa-4.8-py3-none-any.whl (39 kB)\nCollecting ruamel.yaml.clib==0.2.6\n Using cached ruamel.yaml.clib-0.2.6-cp36-cp36m-manylinux1_x86_64.whl (552 kB)\nCollecting setuptools-scm==5.0.2\n Using cached setuptools_scm-5.0.2-py2.py3-none-any.whl (29 kB)\nCollecting shellescape==3.8.1\n Using cached shellescape-3.8.1-py2.py3-none-any.whl (3.1 kB)\nCollecting social-auth-core==4.0.3\n Using cached social_auth_core-4.0.3-py3-none-any.whl (328 kB)\nCollecting sortedcontainers==2.4.0\n Using cached sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)\nCollecting sqlalchemy-migrate==0.13.0\n Using cached sqlalchemy_migrate-0.13.0-py2.py3-none-any.whl (109 kB)\nCollecting sqlalchemy==1.4.31\n Using cached SQLAlchemy-1.4.31-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.6 MB)\nCollecting sqlitedict==1.7.0\n Using cached sqlitedict-1.7.0.tar.gz (28 kB)\n Preparing metadata (setup.py): started\n Preparing metadata (setup.py): finished with status 'done'\nCollecting sqlparse==0.4.2\n Using cached sqlparse-0.4.2-py3-none-any.whl (42 kB)\nCollecting starlette==0.17.1\n Using cached starlette-0.17.1-py3-none-any.whl (58 kB)\nCollecting supervisor==4.2.4\n Using cached supervisor-4.2.4-py2.py3-none-any.whl (749 kB)\nCollecting svgwrite==1.4.1\n Using cached svgwrite-1.4.1-py3-none-any.whl (66 kB)\nCollecting tempita==0.5.2\n Using cached Tempita-0.5.2-py3-none-any.whl (12 kB)\nCollecting tenacity==8.0.1\n Using cached tenacity-8.0.1-py3-none-any.whl (24 kB)\nCollecting tornado==6.1\n Using cached tornado-6.1-cp36-cp36m-manylinux2010_x86_64.whl (427 kB)\nCollecting tqdm==4.62.3\n Using cached tqdm-4.62.3-py2.py3-none-any.whl (76 kB)\nCollecting tuswsgi==0.5.4\n Using cached tuswsgi-0.5.4-py2.py3-none-any.whl (6.8 kB)\nCollecting typing-extensions==4.0.1\n Using cached typing_extensions-4.0.1-py3-none-any.whl (22 kB)\nCollecting tzlocal==2.1\n Using cached tzlocal-2.1-py2.py3-none-any.whl (16 kB)\nCollecting ubiquerg==0.6.2\n Using cached ubiquerg-0.6.2-py2.py3-none-any.whl (13 kB)\nCollecting urllib3==1.26.8\n Using cached urllib3-1.26.8-py2.py3-none-any.whl (138 kB)\nCollecting webencodings==0.5.1\n Using cached webencodings-0.5.1-py2.py3-none-any.whl (11 kB)\nCollecting webob==1.8.7\n Using cached WebOb-1.8.7-py2.py3-none-any.whl (114 kB)\nCollecting whoosh==2.7.4\n Using cached Whoosh-2.7.4-py2.py3-none-any.whl (468 kB)\nCollecting yacman==0.8.4\n Using cached yacman-0.8.4-py3-none-any.whl (12 kB)\nCollecting zipstream-new==1.1.8\n Using cached zipstream_new-1.1.8-py3-none-any.whl (20 kB)\nCollecting importlib-metadata<5,>=0.23\n Using cached importlib_metadata-4.8.3-py3-none-any.whl (17 kB)\nCollecting pytz>=2015.7\n Using cached pytz-2022.1-py2.py3-none-any.whl (503 kB)\nCollecting six>=1.4.1\n Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)\nCollecting cffi>=1.1\n Using cached cffi-1.15.0-cp36-cp36m-manylinux_2_5_x86_64.manylinux1_x86_64.whl (405 kB)\nCollecting schema-salad<9,>=8.2.20211104054942\n Using cached schema_salad-8.2.20211222191353-py3-none-any.whl (511 kB)\nRequirement already satisfied: setuptools in /home/galaxy/galaxy/venv/lib/python3.6/site-packages (from cwltool==3.1.20211107152837->-r /home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt (line 43)) (59.6.0)\nCollecting ruamel.yaml<0.17.18,>=0.15\n Using cached ruamel.yaml-0.17.17-py3-none-any.whl (109 kB)\nINFO: pip is looking at multiple versions of cryptography to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of commonmark to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of coloredlogs to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cloudbridge to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cloudauthz to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of circus to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of cheetah3 to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of charset-normalizer to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of certifi to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of boto to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of boltons to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bleach to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bioblend to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of beaker to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bdbag to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bcrypt to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bagit to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of bagit-profile to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of babel to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of attmap to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of argcomplete to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of appdirs to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of aiofiles to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of adal to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of <Python from Requires-Python> to determine which version is compatible with other requirements. This could take a while.\nINFO: pip is looking at multiple versions of a2wsgi to determine which version is compatible with other requirements. This could take a while.\n\nThe conflict is caused by:\n The user requested pyparsing==3.0.7\n cwltool 3.1.20211107152837 depends on pyparsing!=3.0.2\n cwltool 3.1.20211107152837 depends on pyparsing<3; python_version <= \"3.6\"\n\nTo fix this you could try to:\n1. loosen the range of package versions you've specified\n2. remove package versions to allow pip attempt to solve the dependency conflict\n\n\n:stderr: ERROR: Cannot install -r /home/galaxy/galaxy/server/lib/galaxy/dependencies/pinned-requirements.txt (line 43) and pyparsing==3.0.7 because these package versions have conflicting dependencies.\nERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/user_guide/#fixing-conflicting-dependencies\n"}