LiLabAtVT DeepTE issues

LiLabAtVT / DeepTE

Neural network classification of TE

BSD 3-Clause "New" or "Revised" License

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issues

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ValueError: Kernel shape must have the same length as input, but received kernel of shape (1, 3, 1, 100) and input of shape (None, None, 1, 16384, 1).

#34 Alice520rabbit opened 5 months ago
4
resource exhausted?

#33 mezoderma opened 8 months ago
1
Error while running the example

#32 N-A-M opened 10 months ago
1
Error while running in GPU

#31 manoharbisht1998 opened 10 months ago
1
DeepTE classification differs from that in the curated library

#30 sahoo-rk opened 10 months ago
2
Classification of Ngaro, VIPER, Maverick, Crypton

#29 CSU-KangHu opened 1 year ago
1
There was an error opening the file....

#28 Galaxy-228 opened 1 year ago
0
TypeError: Parameter to MergeFrom() must be instance of same class: expected tensorflow.TensorShapeProto got tensorflow.TensorShapeProto.

#27 dzwzs opened 1 year ago
4
How to classify a TE library of mixed species?

#26 CSU-KangHu opened 1 year ago
3
Output way less than expected

#25 isabelladistefano opened 1 year ago
6
The download of datasets

#24 CSU-KangHu opened 1 year ago
1
python error when running DeepTE.py

#23 JunHe0831 opened 1 year ago
4
FileNotFoundError: [Errno 2] No such file or directory: 'deepTEout//opt_DeepTE.txt'

#22 LI-zijian1 opened 1 year ago
2
AttributeError: 'NoneType' object has no attribute 'group'

#21 helan-1997 opened 2 years ago
6
Can user train models using new data sets?

#20 xiekunwhy opened 2 years ago
5
Output with Errors

#19 bijendrabio opened 2 years ago
4
error running DeepTE.py

#18 svedwards opened 2 years ago
9
python error when running DeepTE.py

#17 Morriyaty opened 2 years ago
3
RM table output incomplete

#16 marco91sol opened 2 years ago
3
Check failed: ret == 0 (11 vs. 0)Thread tf_data_private_threadpool creation via pthread_create() failed

#15 JiyangChang opened 2 years ago
4
Could not create cudnn handle: CUDNN_STATUS_INTERNAL_ERROR

#14 OliveiraDS-hub opened 2 years ago
2
Which results would be more accurate, denovo pipeline or DeepTE?

#13 tinyfallen opened 2 years ago
9
Running DeepTE on computing cluster

#12 heidihyang opened 2 years ago
3
tensorflow.python.framework.errors_impl.InternalError: cudaGetDevice() failed. Status: initialization error

#11 zhaotao1987 opened 2 years ago
8
'str' object has no attribute 'decode'

#10 bsierieb1 closed 2 years ago
2
'tensorflow' has no attribute 'placeholder' ERROR

#9 francicco closed 3 years ago
23
A much different result with the example_data

#8 zhangrengang closed 3 years ago
1
keras?

#7 srobb1 closed 3 years ago
10
problems interpreting output

#6 LisaBlazek closed 4 years ago
2
Can not perform DeepTE

#5 bilibilij closed 4 years ago
3
Percentage of classified sequences

#4 mylena-s closed 4 years ago
2
Create LICENSE

#3 songliVT closed 4 years ago
0
python cannot load modules in 'scripts'

#2 clemgoub closed 4 years ago
4
Bio.Data.CodonTable.TranslationError: ambiguous codon 'TXA' codes for both proteins and stop codons

#1 YTLogos closed 4 years ago
2