songliVT
commented
1 day ago Hello Haidong,
Can you answer this question?
Song
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From: 周小驰(ZHOU XIAOCHI) @.> Sent: Wednesday, November 27, 2024 9:39:18 PM To: LiLabAtVT/DeepTE @.> Cc: Subscribed @.***> Subject: [LiLabAtVT/DeepTE] What does NC mean？ (Issue #36)
Hello, thank you for developing this excellent software.
May I ask what does "NC" mean in All_results.txt? (I didn't find any explanation about this in the documentation. I'm really sorry if I missed something.)
rnd-4_family-80#DNA ClassII NC rnd-4_family-852#DNA/TcMar-Tc1 ClassI NC rnd-4_family-874#DNA/PIF-ISL2EU ClassII NC rnd-4_family-911#LTR/Copia unknown NC rnd-4_family-976#LTR/Gypsy ClassI NC rnd-4_family-997#DNA/hAT-Ac ClassII NC rnd-5_family-1008#LINE/L1-Tx1 ClassII NC rnd-5_family-10099#LINE/Rex-Babar ClassI NC rnd-5_family-10450#LINE/L2 ClassII NC rnd-5_family-10506#LTR/Gypsy ClassII NC rnd-5_family-10642#DNA/hAT-Charlie ClassII NC
I am also confused about how to check if TE is corrected (I already checked working_dir/store_temp_opt_dir/All_results.txt and working_dir/store_temp_opt_dir/ClassI_results.txt). I would be grateful if you could explain this further or give an example.
― Reply to this email directly, view it on GitHubhttps://github.com/LiLabAtVT/DeepTE/issues/36, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ACEEENUMTTSBJJ274G5RKM32CZ65NAVCNFSM6AAAAABSUDKGFSVHI2DSMVQWIX3LMV43ASLTON2WKOZSG4YDANJQGU2DENQ. You are receiving this because you are subscribed to this thread.Message ID: @.***>
Hello, thank you for developing this excellent software.
May I ask what does "NC" mean in All_results.txt? (I didn't find any explanation about this in the documentation. I'm really sorry if I missed something.)
I am also confused about how to check if TE is corrected (I already checked working_dir/store_temp_opt_dir/All_results.txt and working_dir/store_temp_opt_dir/ClassI_results.txt). I would be grateful if you could explain this further or give an example.