andersgs
commented
6 years ago Hi Reema.
The issue is related to your Python version. You need to update to version 3.6 or later. I’ll have to update the docs on that one.
However, there is a singularity container for ngmaster. https://singularity-hub.org/collections/579
I am on my phone on the road. Apologies for the brevity. Will be able to provide more details tomorrow.
Best. A.
DrReemaSingh
I have recently installed ngmaster on centos7 machine. The installation was successful without any error. However, when I am trying to access ngmaster using "ngmaster --test" I am getting following error:-
"File "/home/user/.local/bin/ngmaster", line 9, in
load_entry_point('ngmaster==0.5.1', 'console_scripts', 'ngmaster')()
File "/usr/lib/python3.4/site-packages/pkg_resources/init.py", line 479, in load_entry_point
return get_distribution(dist).load_entry_point(group, name)
File "/usr/lib/python3.4/site-packages/pkg_resources/init.py", line 2703, in load_entry_point
return ep.load()
File "/usr/lib/python3.4/site-packages/pkg_resources/init.py", line 2321, in load
return self.resolve()
File "/usr/lib/python3.4/site-packages/pkg_resources/init.py", line 2327, in resolve
module = import(self.module_name, fromlist=['name'], level=0)
File "/home/user/.local/lib/python3.4/site-packages/ngmaster/ngmaster.py", line 166
cmd = f'echo "{NGprimers}"'
^
SyntaxError: invalid syntax
"
I would highly appreciate any help.
Thanks, Reema,