Laboratory measurements - Githubissues

MIT-LCP / mimic-omop

Mapping the MIMIC-III database to the OMOP schema

MIT License

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Laboratory measurements #32

Open alistairewj opened 6 years ago

alistairewj commented 6 years ago

There is no specimen identifier in MIMIC-III v1.4. However, it would be beneficial to have one so we can populate the SPECIMEN table in OMOP.

Currently, the repository has:

Added a fictitious specimen in order to store data in the specimen table
Added rows in FACT_RELATIONSHIP to link lab value to specimen
Added rows in FACT_RELATIONSHIP to link specimen to lab value

We will need to add the real specimen IDs from the next update of MIMIC-III.