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MaestSi
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MetONTIIME
A Meta-barcoding pipeline for analysing ONT data in QIIME2 framework
GNU General Public License v3.0
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analysis starting from fastq
#60
asogg
closed
1 year ago
21
Preparation of FASTQ
#59
ysuzuki1978
closed
1 year ago
4
Guppy
#58
ObRICa
closed
1 year ago
7
Vsearch might not be working properly.
#57
ysuzuki1978
closed
1 year ago
20
Error in PycoQC
#56
ysuzuki1978
closed
1 year ago
10
error in evaluating the argument 'x'
#55
ysuzuki1978
closed
1 year ago
10
table_collapsed_relfreq_level7.qza' does not exist
#54
Jawen-D
closed
1 year ago
18
Naive Bayes taxonomic classification with ONT?
#53
msmcfarlin
closed
2 years ago
4
Creation of env during mac installation
#52
imanamoeba
closed
2 years ago
3
MetONTIIME
#51
amatoute
closed
2 years ago
13
Path and manifest file error?
#50
JamesN241
closed
2 years ago
14
realpath: missing operand
#49
Jawen-D
closed
2 years ago
11
update to Kit12 chemistry?
#48
tamara-nano
closed
2 years ago
4
error, maximum level available in taxonomy data
#47
Srm18crx
closed
2 years ago
3
Vsearch Dereplicate
#46
timyaro
closed
2 years ago
4
error in Vsearch
#45
ma-diroma
closed
2 years ago
4
Question: Update
#44
tamara-nano
closed
2 years ago
2
issue with Vsearch
#43
asogg
closed
2 years ago
6
To start with fastq file
#42
watayako
closed
2 years ago
5
Installation
#41
hpyle50
closed
2 years ago
16
Identity score in MetONTIIME results
#40
dloukovi
closed
2 years ago
16
consensus taxonomy question
#39
dloukovi
closed
2 years ago
2
setting minimum sequence lenght when running MetONTIIME directly from fastq.gz files
#38
dloukovi
closed
2 years ago
2
Barcode kits
#37
ObRICa
closed
2 years ago
5
IMPORT DATABASE QUESTION
#36
dloukovi
closed
2 years ago
3
evaluate diversity sh
#35
asogg
closed
3 years ago
6
issues with minion_mobile_lab
#34
asogg
closed
3 years ago
16
Analyze Nanopore fastq reads of viral genome?
#33
sekhwal
closed
3 years ago
3
Could not create all the output files
#32
mjherre1
closed
3 years ago
7
Empty collapsed tables-metadata file problems
#31
lgralo
closed
3 years ago
6
Create LICENSE
#30
MaestSi
closed
3 years ago
0
Question
#29
KFeye
closed
3 years ago
13
Taxonomy.qza file not created by import_database.sh
#28
Ksherriff
closed
3 years ago
17
Conda 4.9.2
#27
Ksherriff
closed
3 years ago
15
MetONTIME without basecalling
#26
SrBatracio
closed
3 years ago
1
MetonTIIME
#25
kak8
closed
3 years ago
12
Evaluate_diversity.sh Error
#24
timregan
closed
3 years ago
3
Please help- dont really understand the instruction
#23
amsyarimorni
closed
3 years ago
7
Empty collapsed_feature_tables
#22
mishkb
closed
3 years ago
4
Invalid value for '--input-path': Path
#21
mishkb
closed
3 years ago
12
metontiime and qiime2
#20
dinavb
closed
3 years ago
64
Error starting analysis from fastq.gz files
#19
timregan
closed
4 years ago
9
Disk quota error when "QIIME is caching your current deployment for improved performance."
#18
timregan
closed
4 years ago
4
getting consensus sequence
#17
ganiatgithub
closed
4 years ago
4
Why these default settings?
#16
langse62171
closed
4 years ago
7
How to analysis MinIon transcriptome data?
#15
sekhwal
closed
4 years ago
2
Please help to import sequence.fasta file from NCBI
#14
langse62171
closed
4 years ago
5
threads absent in the blastn code block
#13
splaisan
closed
4 years ago
4
sampling_depth number?
#12
sekhwal
closed
4 years ago
47
How to find differences between the communities in bar graph?
#11
sekhwal
closed
4 years ago
2
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